Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04494 ATGGAAGCGGAGGATGGATCCCCAGCGGCGGCCATATCGCGGTGGAAATTCGAGGTGTCGCGGCGGTACCAACACCTGCTGGACAAAGCGACGCCGCACGTGGGGATGCGGTGGTTGGGGTGTGTGGTGGTGGCGTTGGTGTACGTGCTCCGCGTGTATCTTGTGGAAGGGTTCTACATCGTGTCGTACGGACTTGGCATTTACCTCTTGAACCTTCTGATTGGGTTCCTTTCCCCTCAGGTGGATCCCGAGATTCACGTTGCCGATGGCCCCACCCTCCCTACGACCAGTTCCGATGAGTTCCGCCCCTTCGTTCGCCGCCTCCCAGAGTTCAAGTTCTGGTACTCATTCACAAAGGCATTTTGCATTGCATTTGTGATGACTTTCTTTAGTGCCTTTGATATTCCGGTGTTCTGGCCAATACTCCTCTTCTACTGGGTGGTCCTGTTCACGCTTACTATGAGGAAACAGATATCTCATATGATCAAATACAGATATGTACCATTCTCTTTTGGAAAGCAGCGCTATGTTGGAAAGAGAGCATCAGCAGAAAGCACAAGCCTTTCTTCGGAGGATTGA 579 0.5216 MEAEDGSPAAAISRWKFEVSRRYQHLLDKATPHVGMRWLGCVVVALVYVLRVYLVEGFYIVSYGLGIYLLNLLIGFLSPQVDPEIHVADGPTLPTTSSDEFRPFVRRLPEFKFWYSFTKAFCIAFVMTFFSAFDIPVFWPILLFYWVVLFTLTMRKQISHMIKYRYVPFSFGKQRYVGKRASAESTSLSSED* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04494 192 Pfam Rer1 family 16 176 IPR004932 GO:0016020
Rops2g04494 192 PIRSF AtER_Rer1p 1 187 IPR004932 GO:0016020
Rops2g04494 192 PANTHER PROTEIN RER1 5 183 IPR004932 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04494 Rops-Chr2 82147848 82150867 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04494 3 192 Miscellaneous Gene Families AT2G21600 66.316 7.62e-94 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04494 - - ahf:112799570 315.849
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04494 2 82147848 82150867 Rops2g04494 2 82147848 82150867 ECH
Rops1g01813 1 37348499 37349682 Rops2g04494 2 82147848 82150867 PCT