Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01813 ATGGAGGTGGGCGATGATGTTTCTCCAGAAACTGTGATATCGCAATGGAAATTATCGGTGTGGCGGCAGTATCAGCACGTGCTTGACAAGACAACCCCGCACGTGCTACGGCGTTGGATAGGGTGCTTGGTGGTTGCCTTCATCTACGTCCTCCGTGTCTACTTGATCCAAGGTTTCTACATCGTATCCTATGGTCTTGGCATTTACATCCTTAACCTCCTCATAGGTTTCCTCTCCCCTCAGGTCGATCCTGAGATTCACGATGGCCCCACCCTACCCACCTCTGGATCCGATGAGTTCCGCCCATTCGTTCGCCGCCTCCCCGAATTCAAGTTCTGGTACTCGATAACCAAGGCATTTTGCATCGCATTTCTGATGACTTTCTTTAGTGCCTTTGATGTTCCAGTTTTCTGGCCAATACTGCTCTTTTACTGGGTGGTTCTATTCACGCTTACTATGAGGAGACAGATATCACACATGATCAAATACAAATATGTACCATTCTCATTTGGGAAGCAGCGCTATACTGGAAAGAGAGCATCTGCTGAAAGCGCAAGCCTTCAAATGGACTAA 573 0.4799 MEVGDDVSPETVISQWKLSVWRQYQHVLDKTTPHVLRRWIGCLVVAFIYVLRVYLIQGFYIVSYGLGIYILNLLIGFLSPQVDPEIHDGPTLPTSGSDEFRPFVRRLPEFKFWYSITKAFCIAFLMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQISHMIKYKYVPFSFGKQRYTGKRASAESASLQMD* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01813 190 PIRSF AtER_Rer1p 2 186 IPR004932 GO:0016020
Rops1g01813 190 Pfam Rer1 family 18 176 IPR004932 GO:0016020
Rops1g01813 190 PANTHER PROTEIN RER1 7 182 IPR004932 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01813 Rops-Chr1 37348499 37349682 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g01813 4 186 Miscellaneous Gene Families AT4G39220 73.118 4.52e-99 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01813 - - gmx:100805147 336.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g01813 1 37348499 37349682 Rops1g01813 1 37348499 37349682 ECH
Rops1g01813 1 37348499 37349682 Rops2g04494 2 82147848 82150867 PCT