Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04365 ATGTCAGTTATTGATTCCTATGACATGAGGGGTGAGTTGAAGATGACAGAGTTACCGGGATATTTTCGTTACTGCTTGCACACAGGGAAACTTGTCCTTTTGGCAATTCTGGTCTCTGGAGGAATCGTCTTGCAAATTTTGGCATGTGCCTTGTATAATAATTGGTGGCCAATGCTAACTGCCATAACATATGTGCTTCTTCCCATGCCTTGTCTGTTCTTTGCGGGGTCTGAACGTTCTTCTTTATTTTCTGAATCAGATAGCAGGTGGGTGAATGCAACCAAGTTCTTGACTGGGGCCTCAGCTGTTGGAAGCATTGCCATTCCAGCCATATTGAAGCATTCTGGTGTTATTGGTTGGGGAGCTGTTGCAATGGAACTCTCTTCCTTCTTTGTGTTTGTATTAGCCATAATGTGTTACATACGGATGAGTGATGAAGATGATTACAGTATTCTTTGA 459 0.427 MSVIDSYDMRGELKMTELPGYFRYCLHTGKLVLLAILVSGGIVLQILACALYNNWWPMLTAITYVLLPMPCLFFAGSERSSLFSESDSRWVNATKFLTGASAVGSIAIPAILKHSGVIGWGAVAMELSSFFVFVLAIMCYIRMSDEDDYSIL* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04365 152 Pfam Vacuolar protein sorting 55 31 148 IPR007262 -
Rops2g04365 152 PANTHER LEPTIN RECEPTOR-RELATED 29 149 IPR007262 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04365 Rops-Chr2 79498346 79500584 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04365 15 148 EF-hand Containing Proteins AT1G32410 67.910 3.80e-66 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04365 - - gmx:100775400 248.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g01957 1 39693464 39696271 Rops2g04365 2 79498346 79500584 PCT