Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01957 ATGGCAGACTTACCAGGATATGTACGCTCCTGTTTGAACACAGGGAAACTTGCCTCTTTGGCAATTTTGGTCTCTGGAGGAATTGTTTTGCAAATTTTGGCATGTGCCTTGTATAATAACTGGTGGCCAATGCTAAGTGTGTTAACATATGTGCTTCTTCCGATGCCTTTGCTGTTCTTTGCTGGGTCTGATGATTCTGTATTTTCTGAATCTGATAATAGTTGGGTGAATTTGGCCAAGTTCTTGACTGGAGCCTCAACTCTCGGAGGCATCGCCATTCCGAGCATATTAAAGCATGCTGGGGTTATTGGTTGGGGAGCCTTTGCAATGGAACTCTCTTCATTCTTTGTGTTTGTATTAAGTGTACTGTGTTACCTGTGGATGAATGGGGAAGATGATTACAGTATGCTATGA 414 0.4275 MADLPGYVRSCLNTGKLASLAILVSGGIVLQILACALYNNWWPMLSVLTYVLLPMPLLFFAGSDDSVFSESDNSWVNLAKFLTGASTLGGIAIPSILKHAGVIGWGAFAMELSSFFVFVLSVLCYLWMNGEDDYSML* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01957 137 Pfam Vacuolar protein sorting 55 18 132 IPR007262 -
Rops1g01957 137 PANTHER LEPTIN RECEPTOR-RELATED 15 133 IPR007262 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01957 Rops-Chr1 39693464 39696271 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g01957 1 134 EF-hand Containing Proteins AT1G32410 69.853 3.80e-65 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01957 - - gmx:100500037 258.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g01957 1 39693464 39696271 Rops2g04365 2 79498346 79500584 PCT