Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04344 ATGTACAAAGAGAGAGGTGTTTCTGCCTCCAAATCGGAGGATCGTAAGCGAATCAACGACGTTCTTGACAAACAGCTTGAACGATCTTCTCCCTCCACTTCAAAGCCAATCAACACCAAAGACAGAGACAGAGACAGAGACAAGGACCCTCGTTCTGCCTCCGTCTCAAAAAATTCCAACCTCTCAGAGGAATCTGAAACAGACAGTGAAGAGTCAGATGTTAGTGGTTCTGATGGTGATGACACGTCTTGGATCGCATGGTTCTGCAATCTGAGAGGAAATGAATTCTTCTGCGAGGTTGATGATGATTACATCCAAGATGACTTCAACCTCTGTGGATTAAGCAGTCAAGTGCCGTATTATGATTACGCTCTTGACTTAATTTTGGATGTTGAATCCTCCCATGGTGAGATGTTCACAGATGAACAAAATGAGTTAATTGAATCTGCAGCAGAGATGCTTTATGGTCTGATTCATGCCCGATATGTATTGACAAGCAAAGGAATGGCTGCCATGCTCGACAAGTACAAGAACTTTGATTTTGGCAGATGCCCAAGAGTTTACTGCGCTGGACAACCCTGCCTTCCGGTTGGTCAGTCAGACATCCCTAGGTCAAGTACTGTGAAAATATATTGCCCGAAGTGTGAAGATCTTTACTATCCTCGGTCCAAGTATCAAGGCAACATTGATGGAGCTTATTTTGGAACAACATTTCCGCACCTCTTTCTGATGACGTATGGACAACTGAAGCCACAAAAACTATCGCAAGGCTATGTTCCGAGAGTTTTTGGGTTCAAAATTCACAAGCCATGA 813 0.4379 MYKERGVSASKSEDRKRINDVLDKQLERSSPSTSKPINTKDRDRDRDKDPRSASVSKNSNLSEESETDSEESDVSGSDGDDTSWIAWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGEMFTDEQNELIESAAEMLYGLIHARYVLTSKGMAAMLDKYKNFDFGRCPRVYCAGQPCLPVGQSDIPRSSTVKIYCPKCEDLYYPRSKYQGNIDGAYFGTTFPHLFLMTYGQLKPQKLSQGYVPRVFGFKIHKP* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04344 270 MobiDBLite consensus disorder prediction 1 79 - -
Rops2g04344 270 MobiDBLite consensus disorder prediction 37 53 - -
Rops2g04344 270 Gene3D protein kinase ck2 holoenzyme, chain C, domain 1 76 180 IPR016149 GO:0005956|GO:0019887
Rops2g04344 270 FunFam Casein kinase II subunit beta 181 255 - -
Rops2g04344 270 SUPERFAMILY Casein kinase II beta subunit 81 269 IPR035991 GO:0005956|GO:0019887
Rops2g04344 270 FunFam Casein kinase II subunit beta 76 180 - -
Rops2g04344 270 SMART CK_II_beta_2 83 266 IPR000704 GO:0005956|GO:0019887
Rops2g04344 270 Gene3D - 181 254 - -
Rops2g04344 270 ProSitePatterns Casein kinase II regulatory subunit signature. 184 215 IPR000704 GO:0005956|GO:0019887
Rops2g04344 270 PANTHER CASEIN KINASE II SUBUNIT BETA 62 269 IPR000704 GO:0005956|GO:0019887
Rops2g04344 270 MobiDBLite consensus disorder prediction 1 24 - -
Rops2g04344 270 Pfam Casein kinase II regulatory subunit 83 266 IPR000704 GO:0005956|GO:0019887
Rops2g04344 270 PRINTS Casein kinase II regulatory subunit family signature 180 201 IPR000704 GO:0005956|GO:0019887
Rops2g04344 270 PRINTS Casein kinase II regulatory subunit family signature 202 223 IPR000704 GO:0005956|GO:0019887
Rops2g04344 270 PRINTS Casein kinase II regulatory subunit family signature 100 114 IPR000704 GO:0005956|GO:0019887
Rops2g04344 270 PRINTS Casein kinase II regulatory subunit family signature 155 176 IPR000704 GO:0005956|GO:0019887
Rops2g04344 270 PRINTS Casein kinase II regulatory subunit family signature 230 247 IPR000704 GO:0005956|GO:0019887
Rops2g04344 270 PRINTS Casein kinase II regulatory subunit family signature 83 99 IPR000704 GO:0005956|GO:0019887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04344 Rops-Chr2 79190897 79194171 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04344 K03115 - gmx:100793573 456.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04344 2 79190897 79194171 Rops2g04344 2 79190897 79194171 ECH
Rops1g01981 1 40067966 40069629 Rops2g04344 2 79190897 79194171 PCT