Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04247 ATGCGAGTGAAGGAAATGCACCCGTTGTGCTGTATCTCTCTGGAGAGTCCCGGGATCGGGAGTCACTCGCCGGAGCCAGACGCGGCGGCGCTGTCGAGGACGAGGAGTCTTCCAGCGGGTGGATCTGACGGCATTGGGCGTCGAGGATCGGAGGCCACGGTGGCTGGCGTGCTTTACAAGTGGACCAATTACGGCAAGGGTTGGAGATCCCGGTGGTTCCTTCTTCGCAATGGCATACTCTCTTACGCCAAGATCCGGAGGCCGGAGAACCTTAATCTTTTAACTTCCGTCGACGACGTTCGCCTCATCGGAGAAGTCACCGCCAACCGTCTCGCCAGGATGGACAGGGACGCCGGCAACTCCATGCGCTGGAAGAATCACAAACCTCCGTTTTCTTCTTCGTCTTCTTCTTCTTCTTCTTCTGGTGTTGTTCATCTCAAGATCTCATCATTTAGAGAGAGCAAATCAGACGATAGACGGTTCTATATATTCACAGCAACGAAGACTCTCCATCTGAGAACTGATTCAAGGAAAGACCGTGTGGCTTGGATACAAGCTTTGTTGTCAACTCGTGGCTTGTATCCACTTCGACCACTCAGCGATCATCTCTCTCTTGCACCGAATCATATATCTGTTTCAACCGAGAGGCTTAAGAAGCGGTTGCTTGAAGAGGGTAGCAGTGAGAACCTTGTCAAGGAGTGCGAGCAAATCATGCTGGCTGAGTTCTCCGAATTACAAGAGCAACTTAAAATTCTATGTCAAGAACGATCGAATTTGTTTGACACAATAAGGCAGTTGGAGGCAGCTAACATTGAACCTGAGGCCTCTGCCTTGCATGATGGTGAATACCAATTAACAAAGAATGACTTTTCAAGCCTAGGACGTGGAAAATACAGTGAATGCAGTACAACTGAATCATCTGATGATATTGAGAAACAAGAGGTGGAAGAAGTGTCGGATGAAGATGAAATCTCATATTATGATACTAGAGAGTATTTTACAGAACCTGGTTTTAGGTGTGGGTCAAAAGGAGCTCTGGGTCAAGTGAACATATCTGGGGAAGCTAACACACAATGCATTGATATGGAGAATAGTCCTATTGTGAAGATGGTCAATGATTATGGGTACCCTCAGATAGCAAGGCGAAAGAAGCTTCCGGATCCTGTTGAGAAAGAGAAGGGCGTTAGTCTTTGGTCAATGATCAAAGACAATGTGGGCAAAGATCTCACACGTGTTTGTCTTCCTGTATACTTTAATGAGCCAATATCATCCCTTCAGAAATGTTTTGAAGACTTGGAGTACTCTTATCTTCTGGATCGAGCTTATGAGTATGGAAAATCAGGAAACAGTCTCCTTCGGGCACTGAATGTTGCTGCCTTTGCAGTTTCTGGATATGCATCATCTGAAGGTCGTCATTGTAAACCCTTTAATCCTTTGTTAGGGGAAACTTATGAAGCTGACTATCCTGACAAAGGAATTCGCTTCTTTTCTGAGAAGGTTAGTCACCATCCAACAGTCGTTGCCTGCCACTGTGAAGGTAGAGGATGGAAGTTTTGGGCTGATAGTAACATTCGTTCAAAGTTTTGGGGAAGGTCAATTCAGCTTGACCCAGTTGGAGTTCTGACGCTAGAGTTTGATGATGGTGAAATATTTCAATGGAGCAAGGTTACGACTACAATTTATAATCTTATCCTTGGCAAAATATATTGTGATCATCATGGCAATATGGATATCTGTGGTAATCGCCAATATTCATGCAGACTCAAGTTCAAAGAGCAGACGATTCTTGACCGAAATCCTCACCAGGTGCATGGATTTGTTGAAGATGTAACGGGAAAAAAAGTTGGCACATTATTTGGCAAGTGGGATGACAGCATGTATTATGTTAGTGGTGATGTGAATATCAAGCCAAAAGATTTCACCTCGTCAGATGCAACCTTGTTGTGGAAAAGGACTAAGCCACCACCTAATCTCACCCGGTATAATTTGACATCATTTGCCATCACACTGAATGAGCTTACTCCAGGACTAAAGGAGAAGCTTCCACCTACGGATTGCAGGCTGAGACCAGATCAGCGGCACCTAGAGAATGGGGAATACGAGAAGGCTAATATGGAGAAACAAAGGTTGGAAAAGAGGCAAAGAATGTCAAGGAAAATGCAAGAAAATGGTTGGGAGCCTAGGTGGTTTCACAGAGAAGGTGAAAATGAAACGTTTCGATATGTTGGCGGGTGCATCTTGATTTCAGTTCAGATAATGATAATGAATGGAAATTAG 2277 0.4484 MRVKEMHPLCCISLESPGIGSHSPEPDAAALSRTRSLPAGGSDGIGRRGSEATVAGVLYKWTNYGKGWRSRWFLLRNGILSYAKIRRPENLNLLTSVDDVRLIGEVTANRLARMDRDAGNSMRWKNHKPPFSSSSSSSSSSGVVHLKISSFRESKSDDRRFYIFTATKTLHLRTDSRKDRVAWIQALLSTRGLYPLRPLSDHLSLAPNHISVSTERLKKRLLEEGSSENLVKECEQIMLAEFSELQEQLKILCQERSNLFDTIRQLEAANIEPEASALHDGEYQLTKNDFSSLGRGKYSECSTTESSDDIEKQEVEEVSDEDEISYYDTREYFTEPGFRCGSKGALGQVNISGEANTQCIDMENSPIVKMVNDYGYPQIARRKKLPDPVEKEKGVSLWSMIKDNVGKDLTRVCLPVYFNEPISSLQKCFEDLEYSYLLDRAYEYGKSGNSLLRALNVAAFAVSGYASSEGRHCKPFNPLLGETYEADYPDKGIRFFSEKVSHHPTVVACHCEGRGWKFWADSNIRSKFWGRSIQLDPVGVLTLEFDDGEIFQWSKVTTTIYNLILGKIYCDHHGNMDICGNRQYSCRLKFKEQTILDRNPHQVHGFVEDVTGKKVGTLFGKWDDSMYYVSGDVNIKPKDFTSSDATLLWKRTKPPPNLTRYNLTSFAITLNELTPGLKEKLPPTDCRLRPDQRHLENGEYEKANMEKQRLEKRQRMSRKMQENGWEPRWFHREGENETFRYVGGCILISVQIMIMNGN* 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04247 758 MobiDBLite consensus disorder prediction 122 141 - -
Rops2g04247 758 Gene3D - 692 743 - -
Rops2g04247 758 FunFam Oxysterol-binding protein-related protein 1C 692 746 - -
Rops2g04247 758 Pfam Pleckstrin homology domain 56 187 - -
Rops2g04247 758 SUPERFAMILY Oxysterol-binding protein-like 391 742 IPR037239 -
Rops2g04247 758 SUPERFAMILY PH domain-like 51 189 - -
Rops2g04247 758 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 53 730 IPR000648 GO:0008289
Rops2g04247 758 FunFam oxysterol-binding protein-related protein 1D isoform X1 482 653 - -
Rops2g04247 758 SMART PH_update 52 194 IPR001849 -
Rops2g04247 758 Coils Coil 693 722 - -
Rops2g04247 758 MobiDBLite consensus disorder prediction 18 46 - -
Rops2g04247 758 MobiDBLite consensus disorder prediction 126 141 - -
Rops2g04247 758 ProSiteProfiles PH domain profile. 51 192 IPR001849 -
Rops2g04247 758 Pfam Oxysterol-binding protein 396 740 IPR000648 GO:0008289
Rops2g04247 758 Gene3D - 48 192 IPR011993 -
Rops2g04247 758 Gene3D - 482 654 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04247 Rops-Chr2 77336337 77345549 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04247 K20456 - gmx:100812205 1347.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04247 2 77336337 77345549 Rops2g04247 2 77336337 77345549 ECH
Rops1g02065 1 41577075 41588990 Rops2g04247 2 77336337 77345549 PCT