Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g02065 ATGCGAGTGAAAGAGATGCACCCGCTGTGTTGTATTTCCCTGGAGAGTCCAGGAATCCGCAACCATTCACCGGAGCGGGAGTTGGCCTCGCTTTCCAGGACCAGGAGCCTCCCAGCCGGTGGATCTCACGGCAATGCTGCTCCGGGATCAGAGGCCACGGTGGCCGGAGTTCTCTACAAGTGGACCAATTACGGCAAAGGATGGAGATCGCGGTGGTTCCTCTCGCGGAATGGTGTCCTCTCTTATTGTAAGATCCGCTTCCCGGAAAATCTCAACCTCCTCACCTCCGCCGACGACGTGTGCCTCATCGGAGAGACTTCCGCCAACCGACTCGCACGGATGGACCGCGCCATAACCACCACCACCACGAGACGGAAGCACCATAAAGCTTCTTCTTCTGGCGTAGTCCATCTCAAGATTTCATCATTTAGAGAGAGCAAGTCAGATGATCGACGTTTCTATATATTTACAGCAACGAAGACTCTCCATCTGAGAACTGATTCGAGAAAAGATAGGGTGGCGTGGATACAAGCTTTGGAATCAACTCGTGGCCTGTATCCACTTCAACCACTCAATGATCATCTCTCGATTGCACCCAATGACATTTCCGTGTCAACCGAGCGACTCAAGACCCGCTTGTTTGAAGAAGGTACCGGTGAGAACCTTGTAAACGAGTGCGAACAAATAATGCTCTCTGAGTTCTCTGAAATACAAGGACAACTTGAAGTCCTTTTTCAAGAGCGATCTAATTTGCTTGATACCATAAGGCAGTTGGCGGCAGCTAATACTGAACCCGAGGCCTCTACAATACATGATGGTGACTACCAATTAACAAAGAACGAGTTTTCAAGTCTTGGACATGGAAAATATAGTGAATGCAGTACGACTGAATCCTCAGATGATATTGAGAAACAAGAGATGGAGGAACTGTCAGATGAAGATGAAATCTCATATTATGATACTAGAGAGTGTTTTACAGAGCCTGGTTGCAAGTGTGAGTCAACAGGAGCTATGAATCAAGTGGACAAGTGTAGGGAAGCCAACACACAATGCACTGATATGGAGAATATTCAGCCTGAGAAAGTGGTCTACAATTATAAGCACCCTCAGATAGCAAGACGAAAAAAGCTTCCAGATCCTGTTGAGAAAGAGAAGGGTGTTAGTCTTTGGTCAATGATCAAAGACAACGTGGGAAAAGATCTCACGAGAGTTTGTCTTCCTGTATACTTTAACGAGCCTATATCATCCCTTCAAAAATGTTGTGAGGACTTGGAGTACTCTTACCTTCTGGATCAAGCTTATGAGTATGGAAAATCAGGAAACAGTCTCCTTCGGGCTCTGAATGTTGCTGCCTTTGCAGTTTCTGGATATGCTTCATCTGAAGGTCGTCATTGTAAACCCTTTAATCCTTTGTTAGGAGAAACTTATGAAGCTGATTATCCTGAAAAAGGAATTCGCTTCTTTTCTGAGAAGGTCAGTCACCATCCAACTATCATTGCCTGCCACTGCGAAGGTAGAGGATGGAAGTTTTGGGCTGACAGCAACATCCGTTCAAAGTTTTGGGGAAGGTCAATTCAGCTTGACCCAGAGGGAGTTCTGATCCTAGAGTTCGATGATGGTGAAATATTTCAGTGGAGCAAGGTCACCACAACTATTTATAATCTTATCCTTGGGAAAATATACTGTGATCATCATGGGAACATGGATATACGTGGTAATCGTAAACATTCATGCAGACTCAAGTTCAAAGAGCAGACGATTCTTGACCGAAATCCTCACCAGGTGCATGGATTTGTTGAAGATGCAATGGGTAAAAAAGTTGCCACGTTATTTGGCAAGTGGGATGACAGCATGTATTATATTAATGGTGATGTGAATATCAAGCCAAAAGATTTCCCTTTATCAAACGCATCCTTGTTGTGGAAAAGGACTATACCACCTACTAATCTCACCCGGTATAATTTGACGCCATTTGCCATCACTCTGAATGAGCTTACTCCAGGACTGAAGGAGAAGCTTCCTCCCACGGATTCAAGGCTCAGACCAGATCAACGGCATCTGGAGAATGGGGAATACGAGAAGGCTAATCTGGAGAAACAAAGGTTGGAAAAGCGGCAGAGAATGTCAAGTAAAATACAAGAAAATGGTTGGAAGCCTAGGTGGTTCCAAAGAGAAGATGAAAATGAAACATTTCGATACGTTGGTGGGTACTGGGAAGCGAGAGAGCTTAGAAGATGGGACGGATGCCCACATATATTTGGTGAATTTAAAGAAGATATTGTCCACCCTTCATGTGCATCTTAA 2304 0.4492 MRVKEMHPLCCISLESPGIRNHSPERELASLSRTRSLPAGGSHGNAAPGSEATVAGVLYKWTNYGKGWRSRWFLSRNGVLSYCKIRFPENLNLLTSADDVCLIGETSANRLARMDRAITTTTTRRKHHKASSSGVVHLKISSFRESKSDDRRFYIFTATKTLHLRTDSRKDRVAWIQALESTRGLYPLQPLNDHLSIAPNDISVSTERLKTRLFEEGTGENLVNECEQIMLSEFSEIQGQLEVLFQERSNLLDTIRQLAAANTEPEASTIHDGDYQLTKNEFSSLGHGKYSECSTTESSDDIEKQEMEELSDEDEISYYDTRECFTEPGCKCESTGAMNQVDKCREANTQCTDMENIQPEKVVYNYKHPQIARRKKLPDPVEKEKGVSLWSMIKDNVGKDLTRVCLPVYFNEPISSLQKCCEDLEYSYLLDQAYEYGKSGNSLLRALNVAAFAVSGYASSEGRHCKPFNPLLGETYEADYPEKGIRFFSEKVSHHPTIIACHCEGRGWKFWADSNIRSKFWGRSIQLDPEGVLILEFDDGEIFQWSKVTTTIYNLILGKIYCDHHGNMDIRGNRKHSCRLKFKEQTILDRNPHQVHGFVEDAMGKKVATLFGKWDDSMYYINGDVNIKPKDFPLSNASLLWKRTIPPTNLTRYNLTPFAITLNELTPGLKEKLPPTDSRLRPDQRHLENGEYEKANLEKQRLEKRQRMSSKIQENGWKPRWFQREDENETFRYVGGYWEARELRRWDGCPHIFGEFKEDIVHPSCAS* 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g02065 767 Gene3D - 474 639 - -
Rops1g02065 767 MobiDBLite consensus disorder prediction 21 47 - -
Rops1g02065 767 Pfam Pleckstrin homology domain 56 180 - -
Rops1g02065 767 Pfam Oxysterol-binding protein 388 742 IPR000648 GO:0008289
Rops1g02065 767 Gene3D - 49 184 IPR011993 -
Rops1g02065 767 Coils Coil 685 714 - -
Rops1g02065 767 ProSiteProfiles PH domain profile. 51 184 IPR001849 -
Rops1g02065 767 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 53 741 IPR000648 GO:0008289
Rops1g02065 767 FunFam Oxysterol-binding protein-related protein 2A 684 755 - -
Rops1g02065 767 SUPERFAMILY Oxysterol-binding protein-like 383 758 IPR037239 -
Rops1g02065 767 FunFam oxysterol-binding protein-related protein 1D isoform X1 474 645 - -
Rops1g02065 767 SMART PH_update 52 186 IPR001849 -
Rops1g02065 767 SUPERFAMILY PH domain-like 48 182 - -
Rops1g02065 767 Gene3D - 684 743 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g02065 Rops-Chr1 41577075 41588990 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g02065 K20456 - gmx:100819924 1385.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g02065 1 41577075 41588990 Rops1g02065 1 41577075 41588990 ECH
Rops1g02065 1 41577075 41588990 Rops2g04247 2 77336337 77345549 PCT