Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04220 ATGGAGTGGTCAACTTGTACGGATGAGTATGAGAAGCTCGTGATTCGGATGAGCACCCCAAGGGTTGTCATCGACAATGCCGTTTGCTCCACTGCGACTATAGTCAAGTTTGATAGCGCCAGAAAGCATGGGATTCTTTTGGATGCAGTACAAGTGCTTACTGATTTGAACCTTTCAATTAAGAAGGCCTATGTTTCCTCCGATGGCAAGTGGCTCATGGATGTTTTTCATGTTACTGATCAAAACGGAAACAAGTTAACAGATGATAGAGTTTTAAGATATATCGAACAGTCACTTGGTAGCATTCACAATGGTAGAACCAATCAGAAAAATGGTCTCACTGCCTTGGAATTAACGGGCACAGACCGTGTTGGTCTTCTCTCGGAGGTGTTTGCTGTTCTGGCTGAGCTGCAATGTGATGTGGTGGAGGCTAAGGTTTGGACTCACAATGGCCGAATTGCCTCCTTAATTTACGTAAAAGACTGCAATTCTGGGACCCCAATTGAGGACTCTCAGAAAATTAGTAGGCTCGAAGCACGTTTAAGAAATGTTTTAAAGGGAGACAATGACATCAGGAGTGCAAAAACTTCAATCTCTACTGCTGTCATGCATTCTGAAAGAAGACTTCACCAAATGATGTTCACTGACCGTGATTACCAGAGGAATCCCGTTTTCAAGTTTACTTCAGATACCCCATTAGTGACCGTCCAAAATTGGGCAGAAAGGGGTTATTCGGTTGTTAATGTTCAGTGCAAGGATCGAATTAAGCTTTTGTTCGATGTTGTGTGCAATTTGACAGACATGGAATATGTTGTGTTCCATGCCACTATTAACACAACAGCTGACCAAGCGTACCTGGAGTTTTATATAAGACATAAGGATGGTACCCCAATTAGCTCAGAACCAGAGCGTCAACGTGTGATTCAATGCTTGCAAGCAGCAGTGGAGAGAAGGGCAACTGAGGGTGTTAGGCTAGAGTTGTGCACAGAAGACAGGCAGGGGCTTCTAGCAGAGGTGATGAGAACGTTTCGTGAGAATGGGCTGAATGTGACAAGGGCTGAGATATCTACCACAGTGGACATGACTGCAAATGTTTTCTATGTAACGGATGCGATTGGATACCCAGCTGACCCAAAAGTCATCGAATCTGTTAGGCAGAAAATTGGGTTAAGTAATTTAAAAGTGAAGGAGTTGCCATTTGTGTGTCATCAAAAGGCAGAGAGGGAAGATCAATCAGTGGGTGTTGGTGGGGCAGTGTTGTTGTCTCTGGGGAGCCTTGTGAGAAGGAATCTGTACAATTTGGGTTTAATCAAATCTTGTTCTTAA 1326 0.4374 MEWSTCTDEYEKLVIRMSTPRVVIDNAVCSTATIVKFDSARKHGILLDAVQVLTDLNLSIKKAYVSSDGKWLMDVFHVTDQNGNKLTDDRVLRYIEQSLGSIHNGRTNQKNGLTALELTGTDRVGLLSEVFAVLAELQCDVVEAKVWTHNGRIASLIYVKDCNSGTPIEDSQKISRLEARLRNVLKGDNDIRSAKTSISTAVMHSERRLHQMMFTDRDYQRNPVFKFTSDTPLVTVQNWAERGYSVVNVQCKDRIKLLFDVVCNLTDMEYVVFHATINTTADQAYLEFYIRHKDGTPISSEPERQRVIQCLQAAVERRATEGVRLELCTEDRQGLLAEVMRTFRENGLNVTRAEISTTVDMTANVFYVTDAIGYPADPKVIESVRQKIGLSNLKVKELPFVCHQKAEREDQSVGVGGAVLLSLGSLVRRNLYNLGLIKSCS* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04220 441 SUPERFAMILY ACT-like 112 186 IPR045865 -
Rops2g04220 441 CDD ACT_ACR_3 244 318 - -
Rops2g04220 441 CDD ACT_ACR_2 114 187 - -
Rops2g04220 441 ProSiteProfiles ACT domain profile. 324 411 IPR002912 -
Rops2g04220 441 SUPERFAMILY ACT-like 320 389 IPR045865 -
Rops2g04220 441 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 1 397 IPR040217 -
Rops2g04220 441 ProSiteProfiles ACT domain profile. 115 199 IPR002912 -
Rops2g04220 441 SUPERFAMILY ACT-like 29 97 IPR045865 -
Rops2g04220 441 Pfam ACT domain 325 376 IPR002912 -
Rops2g04220 441 Pfam ACT domain 116 162 IPR002912 -
Rops2g04220 441 CDD ACT_ACR_1 32 103 - -
Rops2g04220 441 Gene3D - 113 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04220 Rops-Chr2 76678208 76681265 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04220 - - gmx:100794729 778.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g00264 8 5242550 5245149 Rops2g04220 2 76678208 76681265 ECH
Rops2g04220 2 76678208 76681265 Rops2g04220 2 76678208 76681265 ECH