Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04185 ATGGACGGTTCCTCCGGTCACCTGAATCTACCTCCAGATGATAAGTCTCCTCCACTTTCTTCTTCTTCTTCTTCTTCTTCTCCCTCCGTGGCCAATCTCCGCCACGTGGACCGCATGATCAACGCCAACCATTACCAATCACCTTCCAGAACAATCTACTCCGACAGGTTCATTCCCAGTAGATCTGCTTCTAAATTCGCTCTGTTTGATATCTCCACGCCCGCTGAGGGCCGTGAGGACAGCTCCAGCGCCTATAATACTCTTCTCCGTACCGCGTTGTTCGGACCGGATGTCGCCGGAGTCACGGCTCCCGTCACGCCGGAGAAGATGACCTCGCTGTCGATGACTCTTCCTAATAGGAACATTTTCCGGTACAAGTCGGAGACTCGGCAGTCCATGCACTCGCTTTCTCCGTTTATGTGTGATGATGCGGTTCCCGGCGTCAATCCTAGCCCGGTTAAGACTCCGAGGAAGGTTCCGCGATCGCCTTATAAGGTTCTGGATGCACCTGCGCTGCAGGATGATTTTTATCTGAATCTTGTGGATTGGTCTTCGCACAATGTGTTGGCTGTTGGTTTGGGTAACTGTGTTTATCTCTGGAATGCTTGTAGCAGCAAGGTAACTAAATTATGTGACTTGGGGATTGACGACTGCGTTTGTTCAGTTGGCTGGGCTCAACGTGGTACGCACCTTGCTGTTGGAACTAGCAATGGTAAAGTCCAGATTTGGGATGCATCTCGATGCAAGAAGATAAGATCCATGGAGGGTCATCGTTTACGTGTTGGGGCCTTGGCCTGGAGTTCATCTCTTTTGTCTTCTGGCGGCCGGGATAAGAATATATATCAACGAGATATACGTGCACAAGAAGATTTTGTCAGTAAACTATCAGGGCACAAATCTGAGGTTTGTGGACTGAAGTGGTCATATGATAACCGTGAGTTGGCATCTGGAGGAAATGACAACAGATTGTTTGTTTGGAATCAACACTCAACCCAGCCTGTCCTGAAGTACTGTGAGCATACAGCAGCTGTTAAAGCAATTGCATGGTCTCCTCATCTTCATGGACTTCTTGCATCTGGGGGAGGAACTGCTGATCGATGTATTCGTTTCTGGAATACAACCACAAACTCACACTTAAGCTGTATGGACACTGGAAGTCAGGTTTGTAATCTTGTCTGGTCCAAAAATGTCAATGAACTGGTAAGCACACATGGCTACTCCCAGAACCAGATAATTGTTTGGAGATACCCCACCATGTCAAAGTTGGCCACTCTTACAGGCCACTCTTATAGAGTTCTTTATCTTGCCATCTCTCCAGATGGACAGACTATTGTGACTGGAGCAGGAGATGAAACACTCAGGTTCTGGAATGTATTCCCTTCCCCTAAATCACAGAATACTGACAGTGAAATCGGAGCATCATCTCTTGGAAGAACTATTATTAGGTGA 1449 0.4762 MDGSSGHLNLPPDDKSPPLSSSSSSSSPSVANLRHVDRMINANHYQSPSRTIYSDRFIPSRSASKFALFDISTPAEGREDSSSAYNTLLRTALFGPDVAGVTAPVTPEKMTSLSMTLPNRNIFRYKSETRQSMHSLSPFMCDDAVPGVNPSPVKTPRKVPRSPYKVLDAPALQDDFYLNLVDWSSHNVLAVGLGNCVYLWNACSSKVTKLCDLGIDDCVCSVGWAQRGTHLAVGTSNGKVQIWDASRCKKIRSMEGHRLRVGALAWSSSLLSSGGRDKNIYQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNSHLSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMSKLATLTGHSYRVLYLAISPDGQTIVTGAGDETLRFWNVFPSPKSQNTDSEIGASSLGRTIIR* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04185 482 SUPERFAMILY WD40 repeat-like 170 458 IPR036322 GO:0005515
Rops2g04185 482 ProSiteProfiles Trp-Asp (WD) repeats profile. 425 458 IPR001680 GO:0005515
Rops2g04185 482 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 295 327 - -
Rops2g04185 482 PANTHER CELL DIVISION CYCLE 20 CDC20 FIZZY -RELATED 36 477 IPR033010 GO:0010997|GO:0097027|GO:1904668
Rops2g04185 482 ProSiteProfiles Trp-Asp (WD) repeats profile. 219 253 IPR001680 GO:0005515
Rops2g04185 482 MobiDBLite consensus disorder prediction 15 30 - -
Rops2g04185 482 Pfam Anaphase-promoting complex subunit 4 WD40 domain 214 268 IPR024977 -
Rops2g04185 482 Pfam WD domain, G-beta repeat 421 457 IPR001680 GO:0005515
Rops2g04185 482 Pfam WD domain, G-beta repeat 292 327 IPR001680 GO:0005515
Rops2g04185 482 Pfam WD domain, G-beta repeat 332 372 IPR001680 GO:0005515
Rops2g04185 482 Gene3D - 153 462 IPR015943 GO:0005515
Rops2g04185 482 ProSiteProfiles Trp-Asp (WD) repeats profile. 295 336 IPR001680 GO:0005515
Rops2g04185 482 ProSitePatterns Trp-Asp (WD) repeats signature. 444 458 IPR019775 -
Rops2g04185 482 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 425 458 - -
Rops2g04185 482 SMART WD40_4 204 244 IPR001680 GO:0005515
Rops2g04185 482 SMART WD40_4 418 457 IPR001680 GO:0005515
Rops2g04185 482 SMART WD40_4 247 284 IPR001680 GO:0005515
Rops2g04185 482 SMART WD40_4 330 372 IPR001680 GO:0005515
Rops2g04185 482 SMART WD40_4 160 201 IPR001680 GO:0005515
Rops2g04185 482 SMART WD40_4 288 327 IPR001680 GO:0005515
Rops2g04185 482 MobiDBLite consensus disorder prediction 1 30 - -
Rops2g04185 482 FunFam FIZZY-related 2 isoform 1 160 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04185 Rops-Chr2 76262139 76269489 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04185 231 460 Miscellaneous Gene Families AT5G08390 21.030 7.54e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04185 K03364 - gmx:100780928 866.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04185 2 76262139 76269489 Rops2g04185 2 76262139 76269489 ECH
Rops2g04185 2 76262139 76269489 Rops1g02133 1 42587648 42593474 PCT