Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04043 ATGGCCAAGATGTCAAAGCTTCCATCCATGTTCTCCCTGAGGAACTTCCTGGTGTTGTCACTGGCTTTGAATGTCAGTTTGATCCTGAAGATGTTGTCTGAGGGTGAAGAAAGTAAGAACATGAGTTGCTTGGAGAAAACCATGGTGCCTGATGCTGAATCCAATAGGGAGGGGCATATAATCAACAAATCACGTTTGGCTGTATCTCCTACTAAGTCTTTCAAGAATTCTACTCGTACTGATGATCATCCTGGAGGCAGGGAGAAAGTAATCAACTTGGATCATGGTGATCCCACTATGTATGAAAGCTTTTGGCGTAGAATGGGTGATAAGACGACCATCATAATTCCGGGATGGCAGTCCTTAAGCTATTTCTCTGATGTCACAAATATTTGTTGGTTTTTGGAACCTGAGTTTGCCAAAGAAGTGACGAGGTTGCATAATGTTGTGGGCAACGCGGTTACAGAAGGTCGCTATATTGTTGTTGGGACAGGTTCCTCTCAGCTAATTCTTGCTGCTCTTTATGCTCTGTCCTCACCTCATGCTGATGAACCAATCAGTGTTGTTTCTGCCGTACCCTATTATTCGTCCTACCCATCAATGGCAGATTACCAGAAATCAGGTCTTTACAAATGGGCTGGTGATGCAGCTAGTTTTGACAAAGATGGTCCTTACATTGAGCTGGTTACTTCTCCGAATAACCCAGATGGATCTGCAAGGCAATCAGTGGTCAACCGAAGCCAGGGACTATTGATTCATGACCTTGCATATTATTGGCCACAGTACACTCCAATACCATCCCCTGCAGATCATGACCTTACGCTTTTCACTGTCTCAAAAAGCACAGGTCATGCAGGGATGCGCATAGGGTGGGCTCTTGTTAAGGACCCAGAGGTGGCAAAAAAAATGACAAAATTCATTGAGCTAAGTACAATTGGTGTCTCGAAGGATTCTCAGCTCAGAGCTGCCAAGGTCTTGAATACAATCTCTGACAGCTGCGAGCAAGAAAACTCTCAAGATGGGGAATCATTTTTCAAGTACAGCTACAGGATCATGGCAGAAAGATGGAAGCTACTTAGAGCAGCAGTTGATGGTGGTGGTTTGTTCAGTTTGCCCAAATTTTCTTCTGGATTCTGCACCTTTTTGGGTCAAGAGTCTGAGATTCAGCCAGCTTTTGCGTGGTTGAAGTGTGAGGGAGATGTAGAGGACTGTGCAAGCTTCCTTAAAGGACACAAAATTTTGACAAGAAGTGGGAGACAATTTGGGGCTAGCCCAAAATATGTAAGGATTAGCATGCTGGATACAGATGAAAATTTTATCCGGTTGATAGATAGGCTTTCTGCCATACAGATATGA 1356 0.4403 MAKMSKLPSMFSLRNFLVLSLALNVSLILKMLSEGEESKNMSCLEKTMVPDAESNREGHIINKSRLAVSPTKSFKNSTRTDDHPGGREKVINLDHGDPTMYESFWRRMGDKTTIIIPGWQSLSYFSDVTNICWFLEPEFAKEVTRLHNVVGNAVTEGRYIVVGTGSSQLILAALYALSSPHADEPISVVSAVPYYSSYPSMADYQKSGLYKWAGDAASFDKDGPYIELVTSPNNPDGSARQSVVNRSQGLLIHDLAYYWPQYTPIPSPADHDLTLFTVSKSTGHAGMRIGWALVKDPEVAKKMTKFIELSTIGVSKDSQLRAAKVLNTISDSCEQENSQDGESFFKYSYRIMAERWKLLRAAVDGGGLFSLPKFSSGFCTFLGQESEIQPAFAWLKCEGDVEDCASFLKGHKILTRSGRQFGASPKYVRISMLDTDENFIRLIDRLSAIQI* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04043 451 Pfam Allinase 91 449 IPR006948 GO:0016846
Rops2g04043 451 Gene3D Aspartate Aminotransferase, domain 1 342 450 IPR015422 GO:0003824
Rops2g04043 451 Gene3D - 78 131 IPR037029 GO:0016846
Rops2g04043 451 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 89 447 - -
Rops2g04043 451 CDD AAT_like 137 446 - -
Rops2g04043 451 Gene3D - 136 339 IPR015421 GO:0003824
Rops2g04043 451 SUPERFAMILY PLP-dependent transferases 84 447 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04043 Rops-Chr2 73805919 73812303 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04043 K16903 - gmx:100777098 708.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04043 2 73805919 73812303 Rops2g04043 2 73805919 73812303 ECH
Rops2g04043 2 73805919 73812303 Rops10g00688 10 16806578 16814393 PCT