Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00688 ATGGCAAAACTCCCTACTTTGTTCTCTTTGAGGCACTTCTTGGTGTTGTCCCTCGCTTTGAATATCAGCTTGATACTGAGAATGGTGTATGAAGGTGAAGAAGGTCACAACCATTCTTGTTTGAATAAGGAAAAAGGGTCATCAATTGCTAGAGCTGATTCTAACACAGAGGGTCACAACAATATCCACAAATCACGAATGATTATATCATCCACTTTGGCTAATTCTACTTGCACAGATCATAGAGGAGACAGGAATAGAGTAATCAATCTAGACCATGGAGATCCGACAGTGTATGAAAAATTTTGGCGACAAACGGGTGACAAGACCACGATAGTAATCCCAGGATGGCAATCGATGAGTTATTTTTCTGATGTGTCAAACATTTGCTGGTTTCTTGAACCTGATTTTGCAAAGGAGGTGGTGAGGTTGCACAAAGTGGTTGGAAATGCAGTAACAGAAGGGCATCACATTGTTGTTGGGACAGGTTCTTCTCAGCTTTTTCTAGCTGCTCTTTATGCTCTGTCCCCTCGTGATGCACCTGAACCTATCAGCGTTGTCTCTGCTTCACCCTATTACTCGTCCTACCCATCAATGACGGATTACCTGAAATCAGGACTTTACAAATGGGCTGGTGATGCAGAAAGTTTTGTCAAAGATGGTCCTTACATTGAGCTGGTTACTTCTCCCAATAATCCTGATGGGCATGTGAGAAGATCTATGGTCAACCGAAGCCAGGGACTTTTGGTTCATGACCTTGCCTATTATTGGCCTCAATACACTCCAATATCATCCCCTGCAGATCATGATCTAACACTTTTCACTGTCTCAAAAAGTACTGGTCATGCAGGAATGCGTATAGGGTGGGCTCTTGTTAAAGACCAAGAGATAGCAAAGAAAATGACAAAATTCATAGAACTCAACACAATAGGAGTCTCAAAGGATTCACAACTCAGGGCTGCTAAGGTTTTAAGGGCAGTTTCTGATAGCTGTGAACAAGGAAACTCCCAAGAGGGCGAGTCATTCTTCAAGTTCAGCCATGAGATCATGTCAAATAGATGGAAGCAACTGAGAGTAGTAGTAGAACGTAGTGGACTCTTCAGTTTGCCCAAATTTTCTTCTGCATTCTGCACCTTTTTTAATCAAGTTTTGGAGCCTCAACCAGCTTTTGTGTGGTTAAAGTGTGAGGGAAATGTGGAAGACTGTGAAAGCTTCCTTCGAGCAAACAACATCTTGACGAGAAGTGGAACTCACTTTGGGGTTAGCCCAAAATATGTAAGAATTAGCATGTTAGATACTGATGAAAATTTTATCCAGTTTCTAGATAGACTCTCTGACATACAGTCTCGATAG 1353 0.4191 MAKLPTLFSLRHFLVLSLALNISLILRMVYEGEEGHNHSCLNKEKGSSIARADSNTEGHNNIHKSRMIISSTLANSTCTDHRGDRNRVINLDHGDPTVYEKFWRQTGDKTTIVIPGWQSMSYFSDVSNICWFLEPDFAKEVVRLHKVVGNAVTEGHHIVVGTGSSQLFLAALYALSPRDAPEPISVVSASPYYSSYPSMTDYLKSGLYKWAGDAESFVKDGPYIELVTSPNNPDGHVRRSMVNRSQGLLVHDLAYYWPQYTPISSPADHDLTLFTVSKSTGHAGMRIGWALVKDQEIAKKMTKFIELNTIGVSKDSQLRAAKVLRAVSDSCEQGNSQEGESFFKFSHEIMSNRWKQLRVVVERSGLFSLPKFSSAFCTFFNQVLEPQPAFVWLKCEGNVEDCESFLRANNILTRSGTHFGVSPKYVRISMLDTDENFIQFLDRLSDIQSR* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00688 450 Pfam Allinase 89 447 IPR006948 GO:0016846
Rops10g00688 450 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 62 446 - -
Rops10g00688 450 Gene3D - 50 129 IPR037029 GO:0016846
Rops10g00688 450 SUPERFAMILY PLP-dependent transferases 85 447 IPR015424 -
Rops10g00688 450 Gene3D - 135 337 IPR015421 GO:0003824
Rops10g00688 450 Gene3D Aspartate Aminotransferase, domain 1 340 448 IPR015422 GO:0003824
Rops10g00688 450 CDD AAT_like 135 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00688 Rops-Chr10 16806578 16814393 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00688 K16903 - gmx:100807013 726.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g00688 10 16806578 16814393 Rops10g00688 10 16806578 16814393 ECH
Rops2g04043 2 73805919 73812303 Rops10g00688 10 16806578 16814393 PCT