Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04025 ATGAAACTCATATTTGTCAGACATTCTGCAATGGGTTCCATTTGGATGTGCCATTTCTTTCTGTTATTGACCTTACTTGACTCTGCTTTTGTTGCAACTCTGGGCAATGATGCAACAGATTCCTTCTGGCTTCTCAGGATTAAATCAGAACTGGTAGATCCACTAGGAGCCCTGAGTAACTGGTCTCCAACAACTCATATCTGCAGCTGGAATGGAATAACATGTGCAGTTGATCAGAAACATATTGAAGGCCTGAATCTGTCTGGTTCAGGAATATCAGGTTCCATTTCAGTTGAGTTCAGTCACCTCATTTCTCTTCAAACACTTGATTTGTCTTCAAATTCCTTTACTGGCTCCATCCCTTCTGAGCTTGGGAAGCTTCAAAATCTAAGAATACTGCAATTATACTCAAATTATATCTCTGGTAACATTCCTGTAGAGATAGGTAATTTGAAGAAGTTGCAAGTTCTTAGAATAGGAGACAACATGTTGACAGGTGAAATTCCACCTAGCATTGTTAACTTGAGTGAGTTGACGGTGTTGGGTCTTGGCTACTGCAACTTAAACGGAAGCATACCTGTTGGGATTGGTAAACTGAAGCATCTAACATCCCTTGATTTACAAATGAACAGTTTTAGTGGCCCCATACCTGAAGAGATTCAAGGCTGTGAAGAGCTCCAAAACTTTGCAGCATCAAACAACACGCTTGAAGGAGACATAACCTCCTTTATGGGGTCTCTCAAATCATTGAAAATTCTGAATCTGGCCAATAACGGTCTGTCTGGATCAATTCCTACAGCCTTGAGTCATCTTTCTAACTTGACATACCTGAATTTTCTTGGAAACAAACTAAATGGAGAAATTCCTTCTGAGCTTAATAGTCTGACTCAGCTGCAGAAGCTAGACTTGTCTAAAAACAACCTTTCTGGATCAATACCCCTCCTTAACACCAAATTGCAGAGTCTAGAAACTCTGGTTTTGTCCGATAATGCTTTGACAGGTAGCATTCCAAGCAACTTCTGCCTCAGAGGTTCAAAGCTTCAGCAACTTTTCTTGGCTAGAAATATGCTCTCTGGAAAATTTCCTTTGGAGGTACTCGGCTGTTCCTCAATCCAACAATTGGACCTTTCTGATAATAGCTTTGGAGGAAAACTTCCATCCAGCCTGGACAAACTACAGAACCTCACAGATCTTGTGCTCAACAACAATAGCTTTGTTGGATCACTACCACCTGAAATTGGAAATATTAGTAGCTTGGGAGGTCTTATCCTATTTGGTAACTTTTTTACAGGTGAAATTCCTGCGGAGATTGGAAGGCTGCAGAGAATGAACTCCCTTTACCTCTATGATAACCAGATGTCTGGGCTTATTCCAAGAGAGTTAACAAATTGCACAAGCTTAAGGGAAGTTGACTTCTTTGGAAATCATTTTACAGGGCCAATTCCAGAGACTATAGGTAAGCTGAAGGATTTAGTTGTTCTTCATTTGAGGCAAAATGACTTGTCTGGTCCAATCCCACCAAGCATGGGGTACTGTAAAAGTCTTCAGATTTTGGCCTTAGCAGATAACAGGTTGTCAGGTTCCATTCCACCCACATTCAGTTACCTTTCAGAACTTAGTAAGATTACCCTTTACAATAACTCATTTGAAGGACCTCTCCCCCTTTCACTCTCTTCTCTCAAAAACCTCAGAATCATAAATTTTTCCCACAACAAGTTCAGTGGAAGTTTCTCTCCTCTCACTGCTTCAAATTCTCTGACTCTTCTGGACTTGACTAACAACACCTTCTCAGGTCCCATCCCTTCCACTCTAAGCAATTCCAAAAATCTCAGCCGTCTTCGACTTGCATACAACAATCTTACAGGAAGCATTCCTTCTGATTTTGTCCATCTTACTGAGCTCAACTTTCTTGATTTATCATTTAACAATTTAACAGGAGATGTGCCGCCTCCACTCTCAAATTCAAAGAAATTAGAACACATCCTGCTGAGCAATAACAGATTGACTGGGAAAATACCTCAGTGGTTGGGAAGCTTTCAAGAACTTGGTGAGCTAGATCTTTCATATAATAACTTCAGTGGAAGGGTACCTGCTGAGCTTGGCAACTGCTCAAAATTACTTAAGCTTTCACTCCATCACAACAATCTCTCTGGTGAAATCCCCCAAGAGATTGGAAAACTCACTTCTCTCAATGTCTTCAATTTGCAAAAGAATAGTCTCTCTGGCCCCATTCCTTCAACAATTCAGCAATGCAGGAAGTTATATGAGCTCAGGCTCTCAGAAAACTTCCTTAAAGGTACTATACCAGTTGAGCTAGGAGGGCTTGCTGAGTTGCAAGTCATATTGGACTTGAGTAAAAATCTCTTCTCTGGTGAGATTCCACCATCTCTAGGAAACCTGATGAAGTTAGAAAGACTCAACCTTTCTTTCAATCAACTTCAAGGAAAAGTTCCTCCTTCACTTGGTAAACTTACCAGCTTGCATGTCCTAAATCTCTCAAATAACCATCTTGAAGGCCAGATTCCTTCAACCTTTACAGGGTTTCCACAAAGCTCTTTCCTGAACAATAACCACTTGTGCGGCCAACCATTAGCATCATGCTCACAATCAACATCACAGGGGAAGATGCAGCTATCAAACACTCAAGTGGCAGCAATCATTGTGGCCATTGTCTTCACTTCCACTGTGATATGCTTAGTTATGTTGTATATCATGCTCAGAATCTGGTGCAACTGGAGAAAAGTTGCCATTTCAAGTGCAGAAGGTGGTACTGTTGCTCAGAAGAGAGAAGAGGGTAGATGGGTCCGTGGTGCTGATCAGAAGACAAGGAATGGAGAGTACTGGAATATGAATTCCTTTGGGTTCATTCCTTATCCAGATAAGCAGAATTCAGTAACAACAACAACTTGCTTATTTAATCTCAAAATGGATGCCATGGAAAATACAAATGTATAA 2955 0.4085 MKLIFVRHSAMGSIWMCHFFLLLTLLDSAFVATLGNDATDSFWLLRIKSELVDPLGALSNWSPTTHICSWNGITCAVDQKHIEGLNLSGSGISGSISVEFSHLISLQTLDLSSNSFTGSIPSELGKLQNLRILQLYSNYISGNIPVEIGNLKKLQVLRIGDNMLTGEIPPSIVNLSELTVLGLGYCNLNGSIPVGIGKLKHLTSLDLQMNSFSGPIPEEIQGCEELQNFAASNNTLEGDITSFMGSLKSLKILNLANNGLSGSIPTALSHLSNLTYLNFLGNKLNGEIPSELNSLTQLQKLDLSKNNLSGSIPLLNTKLQSLETLVLSDNALTGSIPSNFCLRGSKLQQLFLARNMLSGKFPLEVLGCSSIQQLDLSDNSFGGKLPSSLDKLQNLTDLVLNNNSFVGSLPPEIGNISSLGGLILFGNFFTGEIPAEIGRLQRMNSLYLYDNQMSGLIPRELTNCTSLREVDFFGNHFTGPIPETIGKLKDLVVLHLRQNDLSGPIPPSMGYCKSLQILALADNRLSGSIPPTFSYLSELSKITLYNNSFEGPLPLSLSSLKNLRIINFSHNKFSGSFSPLTASNSLTLLDLTNNTFSGPIPSTLSNSKNLSRLRLAYNNLTGSIPSDFVHLTELNFLDLSFNNLTGDVPPPLSNSKKLEHILLSNNRLTGKIPQWLGSFQELGELDLSYNNFSGRVPAELGNCSKLLKLSLHHNNLSGEIPQEIGKLTSLNVFNLQKNSLSGPIPSTIQQCRKLYELRLSENFLKGTIPVELGGLAELQVILDLSKNLFSGEIPPSLGNLMKLERLNLSFNQLQGKVPPSLGKLTSLHVLNLSNNHLEGQIPSTFTGFPQSSFLNNNHLCGQPLASCSQSTSQGKMQLSNTQVAAIIVAIVFTSTVICLVMLYIMLRIWCNWRKVAISSAEGGTVAQKREEGRWVRGADQKTRNGEYWNMNSFGFIPYPDKQNSVTTTTCLFNLKMDAMENTNV* 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04025 984 Pfam Leucine rich repeat N-terminal domain 39 75 IPR013210 -
Rops2g04025 984 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 579 871 - -
Rops2g04025 984 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 289 385 - -
Rops2g04025 984 Gene3D Ribonuclease Inhibitor 38 194 IPR032675 -
Rops2g04025 984 Gene3D Ribonuclease Inhibitor 195 317 IPR032675 -
Rops2g04025 984 ProSiteProfiles Leucine-rich repeat profile. 297 319 IPR001611 GO:0005515
Rops2g04025 984 Gene3D Ribonuclease Inhibitor 649 748 IPR032675 -
Rops2g04025 984 Gene3D Ribonuclease Inhibitor 582 648 IPR032675 -
Rops2g04025 984 FunFam Uncharacterized protein 194 288 - -
Rops2g04025 984 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 37 193 - -
Rops2g04025 984 SMART LRR_typ_2 151 175 IPR003591 -
Rops2g04025 984 SMART LRR_typ_2 247 270 IPR003591 -
Rops2g04025 984 SMART LRR_typ_2 631 655 IPR003591 -
Rops2g04025 984 SMART LRR_typ_2 488 512 IPR003591 -
Rops2g04025 984 SMART LRR_typ_2 295 318 IPR003591 -
Rops2g04025 984 SMART LRR_typ_2 800 823 IPR003591 -
Rops2g04025 984 SMART LRR_typ_2 103 127 IPR003591 -
Rops2g04025 984 SMART LRR_typ_2 560 585 IPR003591 -
Rops2g04025 984 SMART LRR_typ_2 679 703 IPR003591 -
Rops2g04025 984 SMART LRR_typ_2 319 343 IPR003591 -
Rops2g04025 984 SMART LRR_typ_2 392 416 IPR003591 -
Rops2g04025 984 SMART LRR_typ_2 824 847 IPR003591 -
Rops2g04025 984 SMART LRR_typ_2 199 222 IPR003591 -
Rops2g04025 984 PANTHER OS05G0588300 PROTEIN 426 531 - -
Rops2g04025 984 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 482 578 - -
Rops2g04025 984 Pfam Leucine Rich repeats (2 copies) 802 837 IPR025875 -
Rops2g04025 984 SUPERFAMILY RNI-like 374 693 - -
Rops2g04025 984 Gene3D Ribonuclease Inhibitor 752 868 IPR032675 -
Rops2g04025 984 FunFam Uncharacterized protein 386 481 - -
Rops2g04025 984 SUPERFAMILY RNI-like 624 861 - -
Rops2g04025 984 Gene3D Ribonuclease Inhibitor 318 581 IPR032675 -
Rops2g04025 984 Pfam Leucine Rich Repeat 105 127 IPR001611 GO:0005515
Rops2g04025 984 SMART LRR_sd22_2 512 538 - -
Rops2g04025 984 SMART LRR_sd22_2 199 225 - -
Rops2g04025 984 SMART LRR_sd22_2 295 324 - -
Rops2g04025 984 SMART LRR_sd22_2 560 582 - -
Rops2g04025 984 SMART LRR_sd22_2 631 660 - -
Rops2g04025 984 SMART LRR_sd22_2 247 273 - -
Rops2g04025 984 SMART LRR_sd22_2 151 177 - -
Rops2g04025 984 SUPERFAMILY RNI-like 84 406 - -
Rops2g04025 984 Pfam Leucine rich repeat 249 308 IPR001611 GO:0005515
Rops2g04025 984 Pfam Leucine rich repeat 657 716 IPR001611 GO:0005515
Rops2g04025 984 Pfam Leucine rich repeat 585 644 IPR001611 GO:0005515
Rops2g04025 984 PRINTS Leucine-rich repeat signature 298 311 - -
Rops2g04025 984 PRINTS Leucine-rich repeat signature 824 837 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04025 Rops-Chr2 73554481 73558154 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04025 161 889 Receptor kinase-like Gene Family AT5G46330 35.217 6.60e-117 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04025 - - gmx:100818792 1603.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04025 2 73554481 73558154 Rops2g04025 2 73554481 73558154 ECH
Rops2g04025 2 73554481 73558154 Rops10g00675 10 16640281 16643196 PCT