Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00675 ATGGGTTGCATTTGCATGTGCCATTTCATTCTACCATTGACCATAGTGTATACTACTTTTGTTGCAACTCTAGGAGAAAATACAACAGATTCCTATTGGCTTCTGAGAATTAAATCAGAATTGATTGATCCATTAGGAGCCATGAGTAACTGGTCTCCATCAACTCATATTTGCAGCTGGAATGGACTAACATGTGCACTTGATCAAACACATATTATAGGCCTGAATTTGTCTGGTTCAGACATATCAGGTTCCATTTCAGTTGAGTTCAGTCACCTTATTTCTCTTCAAACACTTGATTTATCTTCCAATTCCCTTGCTGGCTCCATCCCTTCTGAGCTTGGAAAGCTTCAAAATCTAAGAATATTGCTATTGTACTCAAATTATCTCTCTGGTAACATTCCCTCAGAGATAGGTAATTTGAGCAAGTTGCAATTTCTTAGATTAGGAGATAACATGCTAACAGGTGAAATCACACCTAGTATAGGCAACTTGAGTGAGTTGACAGTGTTGGGTCTAGCCAACTGCAACTTAAATGGAAGCATACCAGTTGAGGTTGGTAACTTGAAGCATCTAATATCTCTTGATTTACAAGTGAACAATCTGAGTGGTCTCATACCCCTTGAGATTGAAGGCTGTGAAGAGCTTCAAAATTTTGCAGCATCAAACAACATGCTAGAAGGAGCGATACCCTCTTCTATAGGGTCTCTCAAATCATTGACAATTCTGAATTTTGCCAATAACAGTCTATCTGGATCAATTCCTATTTCCTTGAGTCATCTCTCCAACTTGACATACCTGAATTTGCTTGGAAACAAATTGAATGGGGTAATTCCTTCAGAGCTTAACAGTTTGAGCCAGCTACAGAAGCTTGACTTATCCAAAAACAACCTTTCTGGATCACTTACCCTCCTTAGTACCAAACTACAGAATCTTGAAACTCTGGTTCTATCTGATAATGCTTTAACAGGTGGTATTCCAAGTAACTTTTGTCACAGAGGTTCAAAACTTGAGCAACTGTTCTTGGCTAGGAATAAGCTATCTGGCAGATTTCCCATGGAGCTACTCAACTGCTCCTCAATCCAACAATTGGACCTTTCTGATAATAGCTTTGAAGGTGAACTTCCATCCAGCTTGGACAAACTACTGAACCTCAAAGATCTTGCACTCAACAACAACAGCTTCACTGGATCTCTACCTCCACAAATTGGAAACATCACTAGTTTGAAAAGTCTTTTCTTGTTTGGTAACTTTTTTACAGGAAAAATCCCTGTGGAGATTGGAAGGCTTCAGAGATTGAACACAATTTACCTCTATGATAACCAGATGTCTGGACCTATACCAAGAGAGTTAACAAACTGCACAAGCTTAATAGAAATTGACTTCTTTGGAAACCATTTTGAAGGGTCCATTCCAGAGACTATAGGTAAGCTCAAGCACTTAACTGTTCTCCATTTAAGGCAGAATGACTTGTCAGGTCCAATCCCACCAAGCATGGGGTACTGTAAAAGGCTTCAGCTATTGGCAATAGCAGATAACAAGTTCACAGGTTCAATACCACTCACATTCAGTTACCTTTCAGAACTTAGAACCATTACACTTTACAACAACTTCTTTGGAGGACCTCTCCCTAATTCACTCTCCCTTCTCAGAAACCTTAGAATCATAAATTTTTCCAATAACAAGTTCAGTGGCAATATCTTTCCTCTCACTGGTTCAAATTTTCTCACTGTTTTGGACTTGACAAACAACAGCTTCTCAGGTCCAATCCCTTCTATTCTAGCCAACTCCAAAGATCTCACCCGTCTTAGACTTGCACAAAATTATCTTACAGGAAACATTCCTTCTGAATTTGGTCAGCTTGCTGAGCTAAACTTTCTTGATTTATCATTCAACAATTTGACAGGAGATGTGCCACCTCAACTCTCAAAATGCAAGAAAATTGAACACCTTCTGCTGAATAATAACCAATTGAGTGGTGAAATGTCTCCATGGTTGGGAAGCTTACAAGAACTTGGTGAGTTAGATCTCTCATTCAATAACTTCCATGGAAGGATTCCTGCTGAGCTTGGTGACTGCTCAAAATTACTCAAGCTTTCTCTACATCACAACAATCTTTCAGGTGAAATCCCACATGAGATTGGAAATCTCACCTCTCTCAATGTCTTCAACTTGCAAAGGAACAGTCTCTCTGGCCTCATTCCCTCAACAATTCAGCAATGCAAGAAGCTGTATGAACTCAGGCTCTCAGAGAACTTCCTAATAGGTTCTATACCAGTTGAGCTAGGAAGGGTCACTGAGTTACAAGTCATATTGGACTTAAGTAGAAACCACTTTTCTGGTGAAATTCCATCATCTCTTGGAAATCTCATGATGCTAGAAAGACTTGATCTTTCTTTTAATCAACTTCAAGGACAAGTTCCTCCCTCACTTGGTAAGCTAACCAGCCTGCATGTGCTAAACCTCTCAAATAACCATCTCCAAGGCCACATTCCTTCAACCTTTTCAGGGTTCCCACTAAGCTCCTTTCTGAATAATGACCACTTATGTGGCCCCCCATTAGCACTGTGCTCAGAAACTGAGGGGAAGGAGCATATGCAGCTATCAAACACACAAGTGGCAGCAATCATAGTTGCCATTGTGCTTACTTCCACAGTGATATGCTTAGTAATGTTGTATATAATGTTGAGAATGTGGTGCAACTGGAAAAAAGTAGCTATTTCAAGTGTAGATGGTGGAATGGTTGAGCAGAAGAGAGAAGGGACTAAATGGAGCAGTGCTGATCAGAAGACAAGAAAGTACTGGAATGTGAATTCCTTTGAGTTGATTCCTTCACCAGATAAGCATAATTCAGTAACAACTTACATTTGTAATTTCAAATTGGATGCAGAAGCCATGGAAAATACCTTGGCCTGA 2916 0.3978 MGCICMCHFILPLTIVYTTFVATLGENTTDSYWLLRIKSELIDPLGAMSNWSPSTHICSWNGLTCALDQTHIIGLNLSGSDISGSISVEFSHLISLQTLDLSSNSLAGSIPSELGKLQNLRILLLYSNYLSGNIPSEIGNLSKLQFLRLGDNMLTGEITPSIGNLSELTVLGLANCNLNGSIPVEVGNLKHLISLDLQVNNLSGLIPLEIEGCEELQNFAASNNMLEGAIPSSIGSLKSLTILNFANNSLSGSIPISLSHLSNLTYLNLLGNKLNGVIPSELNSLSQLQKLDLSKNNLSGSLTLLSTKLQNLETLVLSDNALTGGIPSNFCHRGSKLEQLFLARNKLSGRFPMELLNCSSIQQLDLSDNSFEGELPSSLDKLLNLKDLALNNNSFTGSLPPQIGNITSLKSLFLFGNFFTGKIPVEIGRLQRLNTIYLYDNQMSGPIPRELTNCTSLIEIDFFGNHFEGSIPETIGKLKHLTVLHLRQNDLSGPIPPSMGYCKRLQLLAIADNKFTGSIPLTFSYLSELRTITLYNNFFGGPLPNSLSLLRNLRIINFSNNKFSGNIFPLTGSNFLTVLDLTNNSFSGPIPSILANSKDLTRLRLAQNYLTGNIPSEFGQLAELNFLDLSFNNLTGDVPPQLSKCKKIEHLLLNNNQLSGEMSPWLGSLQELGELDLSFNNFHGRIPAELGDCSKLLKLSLHHNNLSGEIPHEIGNLTSLNVFNLQRNSLSGLIPSTIQQCKKLYELRLSENFLIGSIPVELGRVTELQVILDLSRNHFSGEIPSSLGNLMMLERLDLSFNQLQGQVPPSLGKLTSLHVLNLSNNHLQGHIPSTFSGFPLSSFLNNDHLCGPPLALCSETEGKEHMQLSNTQVAAIIVAIVLTSTVICLVMLYIMLRMWCNWKKVAISSVDGGMVEQKREGTKWSSADQKTRKYWNVNSFELIPSPDKHNSVTTYICNFKLDAEAMENTLA* 972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00675 971 SUPERFAMILY RNI-like 315 660 - -
Rops10g00675 971 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 279 375 - -
Rops10g00675 971 Gene3D Ribonuclease Inhibitor 186 305 IPR032675 -
Rops10g00675 971 Gene3D Ribonuclease Inhibitor 27 185 IPR032675 -
Rops10g00675 971 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 569 861 - -
Rops10g00675 971 Pfam Leucine Rich Repeat 95 117 IPR001611 GO:0005515
Rops10g00675 971 Gene3D Ribonuclease Inhibitor 525 866 IPR032675 -
Rops10g00675 971 SUPERFAMILY L domain-like 575 855 - -
Rops10g00675 971 Gene3D Ribonuclease Inhibitor 306 524 IPR032675 -
Rops10g00675 971 SMART LRR_typ_2 717 740 IPR003591 -
Rops10g00675 971 SMART LRR_typ_2 285 308 IPR003591 -
Rops10g00675 971 SMART LRR_typ_2 478 502 IPR003591 -
Rops10g00675 971 SMART LRR_typ_2 189 212 IPR003591 -
Rops10g00675 971 SMART LRR_typ_2 93 117 IPR003591 -
Rops10g00675 971 SMART LRR_typ_2 309 332 IPR003591 -
Rops10g00675 971 SMART LRR_typ_2 669 693 IPR003591 -
Rops10g00675 971 SMART LRR_typ_2 237 261 IPR003591 -
Rops10g00675 971 SMART LRR_typ_2 621 645 IPR003591 -
Rops10g00675 971 SMART LRR_typ_2 382 406 IPR003591 -
Rops10g00675 971 SMART LRR_typ_2 790 813 IPR003591 -
Rops10g00675 971 SMART LRR_typ_2 814 837 IPR003591 -
Rops10g00675 971 SMART LRR_typ_2 141 165 IPR003591 -
Rops10g00675 971 Pfam Leucine rich repeat N-terminal domain 30 65 IPR013210 -
Rops10g00675 971 PRINTS Leucine-rich repeat signature 288 301 - -
Rops10g00675 971 PRINTS Leucine-rich repeat signature 814 827 - -
Rops10g00675 971 SUPERFAMILY L domain-like 29 324 - -
Rops10g00675 971 Pfam Leucine rich repeat 311 370 IPR001611 GO:0005515
Rops10g00675 971 Pfam Leucine rich repeat 576 634 IPR001611 GO:0005515
Rops10g00675 971 FunFam Uncharacterized protein 184 278 - -
Rops10g00675 971 FunFam Uncharacterized protein 376 471 - -
Rops10g00675 971 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 472 568 - -
Rops10g00675 971 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 27 183 - -
Rops10g00675 971 PANTHER LEUCINE-RICH REPEAT SERINE/THREONINE-PROTEIN KINASE 1 771 910 - -
Rops10g00675 971 Pfam Leucine Rich repeats (2 copies) 793 827 IPR025875 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00675 Rops-Chr10 16640281 16643196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00675 43 879 Receptor kinase-like Gene Family AT5G46330 35.621 1.36e-126 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00675 - - gmx:100802757 1527.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g00675 10 16640281 16643196 Rops10g00675 10 16640281 16643196 ECH
Rops2g04025 2 73554481 73558154 Rops10g00675 10 16640281 16643196 PCT