Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04019 ATGCAATCGTTATCGTTAAGTATGAGGAGTTTGGTGGATTTGAGGTTACTGGGTAGGGTAAGACAGAGGAGAAGGAATGAGATCGTGGCATGTGGTTCGGAGGGAGAGAATGGGAGTATGTCTCCAAGCTCCAGCACCAGCTCCTTTCTCTCTCGGACACAAACCTACGCACTATTGAAACAGAAAATGGAGGTAGCAGCTAAGTCCGAGGATTACAAGGAAGCTGCTAGAATTAGAGACTCGATAAAGTTATTTGAAGAGGAGGAGCCTGTTTTGCGTCTAAGGAGACTCATGAAGGAAGCAATTGCTGATGAGAGGTTCCAGGATGCAGCTAGTTATCGTGATGAGCTAAAAAAAATTGCCCCGCACTCTCTATTAAAATGTTTCAGTGATGCTACAACATTGGGAATCAGGGTTCAGGTTAGAAGTGTATATATAGAGGGCAGAAGTCAGCCTTCAAAGGGGCTATACTTCTTTGCATATAGAATAAGAATTACCAATAACTCAGACCACTCTGTTCAACTTCTCAGAAGACATTGGATTATAACTGACGCTAATGGGAGAACGGAAAATTTCTGGGGTATTGGGGTTATTGGTCAGCAGCCAGTAATACTTCCCAGGACTAGTTTTGAATACTCTTCAGCATGTCCATTAAGCACACCAAATGGTAGAATGGAAGGTGACTTTGAGATGACCCATGTTGAGAGAATAGGCTCACGATCATTTAATGTGGCCATTGCCCCGTTTTCTCTTTCTCTGCTTGGAGATGATGACGGTCATACTATTTGA 789 0.4322 MQSLSLSMRSLVDLRLLGRVRQRRRNEIVACGSEGENGSMSPSSSTSSFLSRTQTYALLKQKMEVAAKSEDYKEAARIRDSIKLFEEEEPVLRLRRLMKEAIADERFQDAASYRDELKKIAPHSLLKCFSDATTLGIRVQVRSVYIEGRSQPSKGLYFFAYRIRITNNSDHSVQLLRRHWIITDANGRTENFWGIGVIGQQPVILPRTSFEYSSACPLSTPNGRMEGDFEMTHVERIGSRSFNVAIAPFSLSLLGDDDGHTI* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04019 262 ProSiteProfiles UVR domain profile. 53 88 IPR001943 GO:0005515
Rops2g04019 262 Pfam UvrB/uvrC motif 59 87 IPR001943 GO:0005515
Rops2g04019 262 Pfam UvrB/uvrC motif 93 120 IPR001943 GO:0005515
Rops2g04019 262 Pfam ApaG domain 149 232 IPR007474 -
Rops2g04019 262 PANTHER OS05G0170800 PROTEIN 20 258 - -
Rops2g04019 262 Gene3D ApaG domain 127 260 IPR036767 -
Rops2g04019 262 ProSiteProfiles UVR domain profile. 88 123 IPR001943 GO:0005515
Rops2g04019 262 SUPERFAMILY ApaG-like 133 252 IPR036767 -
Rops2g04019 262 ProSiteProfiles ApaG domain profile. 131 258 IPR007474 -
Rops2g04019 262 SUPERFAMILY C-terminal UvrC-binding domain of UvrB 54 86 IPR036876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04019 Rops-Chr2 73512927 73516556 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04019 - K06195 gmx:100784413 402.519
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04019 2 73512927 73516556 Rops2g04019 2 73512927 73516556 ECH
Rops2g04019 2 73512927 73516556 Rops10g00662 10 16360358 16364224 PCT