Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00662 ATGCAGTCGTTAAGCATAAAGGCTTTCATGGATTTCCGGTTACCGGTTGGAACGGATTCGAGGCAATGGGTGAATTGCACGAACCGGAGGAGAAAGATTGGGAGTGTAACCGTAGCGTGTGGGGCAGAGAGGGGAGAGAGTTCAAGCTCGAGTTCGTTTTTGTGTCGGAGTCACAACTACGCGATCTTGAAACAACGAATGGAGGTAGCTGCTAAATCCCAGGATTACGAAGAGGCTGCGAGGATTCGTGACTCGTTAAAATGTTTTGAAGATGAGGTGCCGGTTTTGCGTTTGCGGAGGTTGTTGAAGGAATCAATTGCTGATGAGAGATTTGAGGATGCAGCTGCATATCGTGATGAGCTAAAAGAAATTGACCCTCATTCTCTCTTAAAATGTTCAAGTGATTCTACAACCTTGGGAATGAGGGTCCAAGTTAGGAGTGTATATATAGATGACAGAAGTGAACCTTCAAAAGAGCTATACTTCTTTGCATATAGAATCAGAATCACCAATAACACAAACCGCCCTGTTCAACTTCTCAGAAGGCATTGGATTATAACTGATGCTAATGGGAAAACTGAAAATGTCTGGAGGATTGGGGTTGTTGGTGAACAACCAACTATACTTCCAAGGACTAGTTTTGAATACTCTTCCTCATGCCCATTAAGCACACAAAATGGTAGAGTGGAGGGTGACTTTGAGATGATACATATTGATCGAGTAGGCTCAAGAGCATTTAATGTGGCCGTTGCTCCTTTCTCTCTCTCTCTACTTGGAGATGATGATGGTCAAACTATTTGA 801 0.4345 MQSLSIKAFMDFRLPVGTDSRQWVNCTNRRRKIGSVTVACGAERGESSSSSSFLCRSHNYAILKQRMEVAAKSQDYEEAARIRDSLKCFEDEVPVLRLRRLLKESIADERFEDAAAYRDELKEIDPHSLLKCSSDSTTLGMRVQVRSVYIDDRSEPSKELYFFAYRIRITNNTNRPVQLLRRHWIITDANGKTENVWRIGVVGEQPTILPRTSFEYSSSCPLSTQNGRVEGDFEMIHIDRVGSRAFNVAVAPFSLSLLGDDDGQTI* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00662 266 Pfam ApaG domain 152 236 IPR007474 -
Rops10g00662 266 Gene3D ApaG domain 131 261 IPR036767 -
Rops10g00662 266 SUPERFAMILY ApaG-like 137 256 IPR036767 -
Rops10g00662 266 SUPERFAMILY C-terminal UvrC-binding domain of UvrB 61 90 IPR036876 -
Rops10g00662 266 ProSiteProfiles ApaG domain profile. 135 262 IPR007474 -
Rops10g00662 266 PANTHER OS05G0170800 PROTEIN 38 262 - -
Rops10g00662 266 Gene3D UVR domain 59 93 - -
Rops10g00662 266 ProSiteProfiles UVR domain profile. 92 127 IPR001943 GO:0005515
Rops10g00662 266 Pfam UvrB/uvrC motif 63 87 IPR001943 GO:0005515
Rops10g00662 266 Pfam UvrB/uvrC motif 97 124 IPR001943 GO:0005515
Rops10g00662 266 ProSiteProfiles UVR domain profile. 57 92 IPR001943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00662 Rops-Chr10 16360358 16364224 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00662 - K06195 gmx:100799029 388.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g00662 10 16360358 16364224 Rops10g00662 10 16360358 16364224 ECH
Rops2g04019 2 73512927 73516556 Rops10g00662 10 16360358 16364224 PCT