Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04006 ATGGCCACACAATCGCCACCTACTCGCTCTCCCACCGCCACCGACGAAAACCTTCCCAACCAAGGTGCTGAAATTGTGCAACCAACAAATGTGGATCAGCAAAATGCCAGAGAGGAGCCTGTTAAACAGAGTTCAACTACGTCAGTCTTTGTGAACTCGCAACCATTGCGAGAAGATCAAGTTCAGAATGCTGTGAAATTTCTTTCACACCCAAAAGTTAAAGGTTCACCTGTCATCTACAGGCGGTCATTTCTGGAGAAGAAGGGCCTTACAAAGGAGGAGATTGATGAAGCCTTTCGGCGTGTGCCAGATTCGGCTCCGACTGTGCAGACTGCTGGTGTAAATCAAGATGGACAATTGAAATCATCATCAAACATTCAGCAACAGGCCCAACAACAAACCTTGCAGCCTGGTTTACCTGCCTCTACTGCTGTTAATACTTCATCAGGAACCTTAGCAAGATCCAGATTTCGCTGGTCCCATGCCCTTATTGCAGTTGGATTACTGGCTGCTTCAGGTGCTGGAACTGCTTTAATAATTAAGAATTCCATTCTTCCTCGGTTAAAATCTTGGATACGCAAGGTTGTCTTAGATGAAGATGATGAACAATTAAAGAAAACTGACAGCAAACCAACTTTGGCGGAAGAAGCTGCACAAGCTGCAAAATCAGCTGCAGCTGCAGCTGCTGATGTAGCAAAAGCAAGCCAAGAAATGCTGGCTTCAAAGGGTGAAGAGAGGAAATACTTTGTGGAAGTTGTGAACCTTTTAGATAAGCAAATACAAGAAATGAAGTTAATGACAAATGCAATAAGAAGATTGGAAGGGCAAGAAGATCTCCGAATCAGTCATTCAAGTTCGAAGCAACTGATTATGAATGGCAAGGCAGACTATGACTTGCGTTCAGTGAGATCTTTATCCCCTCCTGCATCGGTTGAACCATCAAGTGCTCCTCATCCAAAGTCATATATGGAGATGATGGCCATGGCCCAAAGAGGGGAGAAGCCTTCTAATATTAGACCTTGGGAGGTTAGTCAGGTGCAAAACACTTCTACCCAAGTGCTTCAGTCTCAAGTAAATGGTGAAGACTTGAATACCAAGGTCCAAGATACCACTCATTCAAATGGGGATGACCCATTGTCCTGGTGGCAGAGGAAAAATGTCAGAATCAGAGAGATTGATGAAAATGAGTATAATGGAGCACCTTATGGTGCTGCACCTAGTCAGCAGCCATTACAACGTGTGTGGGTTCCTCCTCAACCTCCGCCCATAGCTATGCCGGAAGCTGCAGAAGCAATCAGACGGCCAAAGGTGGTCCAAAAGGAACAGGTGCCAGATAATCAGTCAGTAGCTCATTCTTCAGACATATCTGATGAGGTGCATAGCACCCCAAAACCATCCGAATCTGAAGGTACTGTAGAGGGCAGCAATGCGAGCTCACTTATCAGCTCTAGTGAGATACAAGAAGACCATGAAGCCAAATCTGAAGAGTAA 1491 0.452 MATQSPPTRSPTATDENLPNQGAEIVQPTNVDQQNAREEPVKQSSTTSVFVNSQPLREDQVQNAVKFLSHPKVKGSPVIYRRSFLEKKGLTKEEIDEAFRRVPDSAPTVQTAGVNQDGQLKSSSNIQQQAQQQTLQPGLPASTAVNTSSGTLARSRFRWSHALIAVGLLAASGAGTALIIKNSILPRLKSWIRKVVLDEDDEQLKKTDSKPTLAEEAAQAAKSAAAAAADVAKASQEMLASKGEERKYFVEVVNLLDKQIQEMKLMTNAIRRLEGQEDLRISHSSSKQLIMNGKADYDLRSVRSLSPPASVEPSSAPHPKSYMEMMAMAQRGEKPSNIRPWEVSQVQNTSTQVLQSQVNGEDLNTKVQDTTHSNGDDPLSWWQRKNVRIREIDENEYNGAPYGAAPSQQPLQRVWVPPQPPPIAMPEAAEAIRRPKVVQKEQVPDNQSVAHSSDISDEVHSTPKPSESEGTVEGSNASSLISSSEIQEDHEAKSEE* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04006 496 Coils Coil 256 276 - -
Rops2g04006 496 MobiDBLite consensus disorder prediction 417 496 - -
Rops2g04006 496 Gene3D - 49 111 IPR036388 -
Rops2g04006 496 MobiDBLite consensus disorder prediction 441 456 - -
Rops2g04006 496 MobiDBLite consensus disorder prediction 465 485 - -
Rops2g04006 496 FunFam Peroxisomal membrane protein PEX14 49 111 - -
Rops2g04006 496 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX14 1 491 IPR025655 GO:0005515|GO:0005778|GO:0016560
Rops2g04006 496 Pfam Pex14 N-terminal domain 57 101 IPR006785 -
Rops2g04006 496 MobiDBLite consensus disorder prediction 1 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04006 Rops-Chr2 73258703 73264949 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04006 K13343 - gmx:100784152 688.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04006 2 73258703 73264949 Rops2g04006 2 73258703 73264949 ECH
Rops2g04006 2 73258703 73264949 Rops10g00653 10 15994985 16000160 PCT