Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00653 ATGGCTACTCAATCGCCTTCTCCTCCCAATTCCACTCCTCAGAACACAGGTGGAGGTGCTGAAATTGTGCAACCTACAAGTGTGGATCAGCATAATTCTGGGGAAGGGCTTGTTCAACAGAGTTCAACAACATCGGTCTTTGTGAACTCAGAACCAATGCGGGAGGAACAAGTTCAGAATGCTGTGAAATTCCTGTCACACCCAAAAGTTAGAGGCTCTCCTGTCATCTACAGGCGTTCATTTCTGGAGAATAAGGGCCTCACGAAGGAGGAGATAGATGAAGCCTTTCGGCGTGTGCCTGATTCACCTTCAAGTGTGCATACAACTGGTGTAAATCAAGATGGGCAATTGAAGCCATCATCTGACATTCAGCAGCAAGGCCAACCACAGGCTTTGCAGCCGGCTGTATCTGCTTCGGCTGGTGTTACTAATTCGTTGGGAACCTTATCACGCCACAGATTTCACTGGTCACATGTCCTTATTACAGTTGGATTACTGGTTGGTTCTGGTGCTGGAACAGCTATGCTAATCAAGAAATCTGTTCTTCCTTGGTTAAAATCTTGGATACGCAATGTTGTCTTAGAAGAAGAATATGACCAATTAAAGAGAACAGACTCAAAACCAACATTGGCAGAAGAAACTGCACAAGCTGCAAAAGCAGCTGCAGCTGCAGCTGCAGAAATGGCAAAAGCTAGCCAAGAAATACTGACTTCAAAATTTGAAGAGAAGAGATACTTTGTGGAAGTTGTGAGCCTTTTAGATAAGCAAGTGCAAGAAATGAAGTTAATGACTAATGCGATAAGAAGATTGGAAGCTTCTAGTGGACACTCCGTCTCAAAGCAAGAAGATAGCCAAGTCACTCGAACAAAATCGAAGATACAGCAACTGATTGTGAATGGAAAGGCAGACTATGATTTGCATTCAGTGAGATCTTCGTCCGCACCTGCTTCTGTTGAACCATCTAGTGCTCCTCATCCAAAGTCATATATGGAGATAATGGCCATGATCCAAAGAGGGGAGAAGCCTTCTAACATTAGAGATATTGATGATTCACCCCCCAACCCTAATCAGCAACCATCAAATCCTCGTTTAGCACCTAGAGCCAAGCCTTGGGAAGTTAGTCAGGTGCAAAGCACCTCTACCCAAGTCCTTCAGTCTGAAGTAAACGGCAAGGACTCAGGTTTCAAGATCCAAGATAATGGTGACAACCCAGTGCCCTGGTGGCAAACGAAAAATGTCAGAATCAGAGAGATTGATAATGGAATTGAGTATAATGGAGCACCTTATGTATCCCGTCCGCAGCCAGTCCAACGTAAGTGGGTTCCCCCTCAATCCCCACCCATTGCTATGCCGGAGGCTGGAGAAGCAATCAGACGCCCAAAGCCAGTGGTCCAAGAAGAACTGATGCCAGATGATCAGCCAGTAACTCATTCTTCAGACATCTCTGATGGAGTGGAGAGGATCTCAAAACAATCCAAATCTGAAGATGAAATAGATGGCAGCAGGGTCAACTCACTTCTCAACTCTGGTGAGATCCAAGATCATGATGTCAATTACCAAGAGCAATGA 1569 0.4512 MATQSPSPPNSTPQNTGGGAEIVQPTSVDQHNSGEGLVQQSSTTSVFVNSEPMREEQVQNAVKFLSHPKVRGSPVIYRRSFLENKGLTKEEIDEAFRRVPDSPSSVHTTGVNQDGQLKPSSDIQQQGQPQALQPAVSASAGVTNSLGTLSRHRFHWSHVLITVGLLVGSGAGTAMLIKKSVLPWLKSWIRNVVLEEEYDQLKRTDSKPTLAEETAQAAKAAAAAAAEMAKASQEILTSKFEEKRYFVEVVSLLDKQVQEMKLMTNAIRRLEASSGHSVSKQEDSQVTRTKSKIQQLIVNGKADYDLHSVRSSSAPASVEPSSAPHPKSYMEIMAMIQRGEKPSNIRDIDDSPPNPNQQPSNPRLAPRAKPWEVSQVQSTSTQVLQSEVNGKDSGFKIQDNGDNPVPWWQTKNVRIREIDNGIEYNGAPYVSRPQPVQRKWVPPQSPPIAMPEAGEAIRRPKPVVQEELMPDDQPVTHSSDISDGVERISKQSKSEDEIDGSRVNSLLNSGEIQDHDVNYQEQ* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00653 522 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX14 1 501 IPR025655 GO:0005515|GO:0005778|GO:0016560
Rops10g00653 522 MobiDBLite consensus disorder prediction 99 136 - -
Rops10g00653 522 MobiDBLite consensus disorder prediction 102 136 - -
Rops10g00653 522 MobiDBLite consensus disorder prediction 272 292 - -
Rops10g00653 522 MobiDBLite consensus disorder prediction 468 522 - -
Rops10g00653 522 Gene3D - 46 108 IPR036388 -
Rops10g00653 522 FunFam Peroxisomal membrane protein PEX14 46 108 - -
Rops10g00653 522 MobiDBLite consensus disorder prediction 483 500 - -
Rops10g00653 522 Pfam Pex14 N-terminal domain 54 98 IPR006785 -
Rops10g00653 522 Coils Coil 253 273 - -
Rops10g00653 522 MobiDBLite consensus disorder prediction 1 45 - -
Rops10g00653 522 MobiDBLite consensus disorder prediction 343 387 - -
Rops10g00653 522 MobiDBLite consensus disorder prediction 501 515 - -
Rops10g00653 522 Pfam Family of unknown function (DUF5572) 324 373 - -
Rops10g00653 522 MobiDBLite consensus disorder prediction 372 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00653 Rops-Chr10 15994985 16000160 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00653 K13343 - gmx:100807229 703.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04006 2 73258703 73264949 Rops10g00653 10 15994985 16000160 PCT