Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03777 ATGTCACGCACTCGCATCGGCATTCACCGCTTCCGCTACTGCTACAGCGCATTATCTTCGACTCTATCATCATCTTCATTAACTCGCTCTCAATTCCAAAACCGATCCTCTCTCTCTTCCTTTCTCTCTCATCATCCCAAACATATCAGTCCCACACCTAATCCCTTCCCCTTCCCCTTCCACTTGCATTCTCATTGTTACTCCTCATCTTCCTCTTCCACTCCTAAACAACACTTGGTTAATGGCGATGATGATTATCCCAGTGGTGATTTCGATTTTCAGCCTATTACTGGCTGGAAAAAATTTATCGTCAACCTCAAGTTGCAATTAGCCTTCCCCTGGAAGCGTATTCGCTACGGCACCGTTTTGAAAATCAAGTTGCGAGGCCAGATATCGGATCAGTTGAAGAGTAGATTCTCCCGTGTATTACCTCTGCCTGAGATATGTGATAATTTGGTGAAAGCAACGTATGATCCTCGTATTTCTGGTATCTACCTTCATATTGATACTTTAAATTGCGGCTGGGCGAAACTCGAAGAAATTCGAAGGCACATCTTCAATTTCAGAAAATCAGGAAAATTTGTTGTGGCTTATGTCCCTTCATGTCGAGAAAAAGAATATTACATTGCATGCACGTGTGATGAGATATATGCCCCACCAAGTGCTTATTTTTCTCTGTTTGGGTTGGCTGTTCAAGCCCCATTCCTCAGAGGTGTCTTAGACAACCTAGGAATCGAACCACAAGTGGAAAAGATAGGCAAATATAAAAGTGCAGGAGATCAACTAACCCGTAGAACCATGTCTGAAGATAATCGTGAGATGCTGACTGCATTGCTTGATAATATCTATACAAATTGGCTGGATAAAGTTTCTTCCGCTAGAGGAAAGAAAAGAGAAGATATTGAGAACTTCATAAATGAAGGTGTCTATCAAGTAGACAGGCTGAAAGAAGAGGGCTTCATATCAGACGTAATCTATGATGATGAGGTTATAGCTAGGTTGAAGGAGAGACTTCAGGTGAAAACAGAAAAGAATCTCCCTATGGTTGATTTCAGAAAATACACTGGAGTTAGGAAACGGACTCTTGGAATATCAGGTGGTAAAGAACTGATAGCCATCATCCGAGCCTCCGGTAGCATTCGTCGTGTTGAGAGTCCATTAAATGCCCGTAGCGCAGGTATCATTGGAGAGAAGTTCATTGAGAAGATTCGCAGTGTCAGAGAGTCAAATAAATACAAGGCTGCCATTATCCGAATTGACAGTCCAGGAGGTGATGCTCTTGCTTCTGATTTGATGTGGAGAGAAATCAGGCTTCTGGCTGCCTCGAAACCAGTCATTGCTTCAATGTCTGATGTGGCAGCAAGTGGAGGGTACTACATGGCAATGGGAGCAGGAGCTATTGTTGCAGAAAGTCTTACCTTAACTGGTTCAATTGGAGTGGTCACAGGAAAATTTAACGTTGGGAAACTTTATGAGAAGATTGGCTTCAACAAAGAAATTATATCAAGGGGTAGATATGCTGAGCTCCTTGCAGCCGAACAGCGTTCTTTTAGATATGATCATTCTCTCTCTCTCTCTCTCGGGTACAGGCCTGATGAAGCAGAGCTGTTTGCCAAGTCTGCACAGAATATTTATAAACAATTTCGAGATAAGGCAGCTCTTTCCAGATCAATGACTGTAGACAAGATGGAAGAGGTTGCACAGGGGAGGGTTTGGACTGGTAAGGACGCAGCTTCTCATGGTTTGGTCGATGCCATTGGTGGGCTTTCTCGAGCTATTGCCATAGCAAAACTGAAGGCCAATATACCTCAAGACAGACAGGTTACGGTTGTGGAGCTCTCAAGACCGAGCCCTACCATACCCGAGATTTTAAGTGGTCTAGGTAATTCTCTCGTTGGAGTGGACAGAACTTTAAAGGAACTGCTACAGGACTTGACATTTTCTGATGGAATTCAAGCCCGGATGGATGGAATCATGTTTCAGAAATTGGAAGGATATCCACACGCCAACCCCATTGTGGCATTGATAAAAGATTACCTCAGTTCCCTGTAG 2052 0.4347 MSRTRIGIHRFRYCYSALSSTLSSSSLTRSQFQNRSSLSSFLSHHPKHISPTPNPFPFPFHLHSHCYSSSSSSTPKQHLVNGDDDYPSGDFDFQPITGWKKFIVNLKLQLAFPWKRIRYGTVLKIKLRGQISDQLKSRFSRVLPLPEICDNLVKATYDPRISGIYLHIDTLNCGWAKLEEIRRHIFNFRKSGKFVVAYVPSCREKEYYIACTCDEIYAPPSAYFSLFGLAVQAPFLRGVLDNLGIEPQVEKIGKYKSAGDQLTRRTMSEDNREMLTALLDNIYTNWLDKVSSARGKKREDIENFINEGVYQVDRLKEEGFISDVIYDDEVIARLKERLQVKTEKNLPMVDFRKYTGVRKRTLGISGGKELIAIIRASGSIRRVESPLNARSAGIIGEKFIEKIRSVRESNKYKAAIIRIDSPGGDALASDLMWREIRLLAASKPVIASMSDVAASGGYYMAMGAGAIVAESLTLTGSIGVVTGKFNVGKLYEKIGFNKEIISRGRYAELLAAEQRSFRYDHSLSLSLGYRPDEAELFAKSAQNIYKQFRDKAALSRSMTVDKMEEVAQGRVWTGKDAASHGLVDAIGGLSRAIAIAKLKANIPQDRQVTVVELSRPSPTIPEILSGLGNSLVGVDRTLKELLQDLTFSDGIQARMDGIMFQKLEGYPHANPIVALIKDYLSSL* 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03777 683 Gene3D - 261 356 - -
Rops2g03777 683 Gene3D - 121 259 - -
Rops2g03777 683 SUPERFAMILY ClpP/crotonase 113 326 IPR029045 -
Rops2g03777 683 CDD S49_Sppa_N_C 371 597 IPR047272 -
Rops2g03777 683 Gene3D - 367 517 - -
Rops2g03777 683 SUPERFAMILY ClpP/crotonase 370 588 IPR029045 -
Rops2g03777 683 Gene3D - 526 651 - -
Rops2g03777 683 CDD S49_SppA_67K_type 123 336 IPR047217 -
Rops2g03777 683 PIRSF Protease_4_SppA 54 683 IPR004634 GO:0006465|GO:0008233|GO:0016020
Rops2g03777 683 Pfam Peptidase family S49 188 340 IPR002142 GO:0006508|GO:0008233
Rops2g03777 683 Pfam Peptidase family S49 439 601 IPR002142 GO:0006508|GO:0008233
Rops2g03777 683 NCBIfam signal peptide peptidase SppA 372 596 IPR004635 GO:0006508|GO:0008233
Rops2g03777 683 PANTHER PROTEASE 4 80 682 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03777 Rops-Chr2 69668482 69676360 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03777 K04773 - gmx:100809623 1036.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03777 2 69668482 69676360 Rops2g03777 2 69668482 69676360 ECH
Rops2g03777 2 69668482 69676360 Rops10g00403 10 11201673 11212224 PCT