Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00403 ATGTCGACACTGCTTCTACCCTCTCCTCCCCTCACCTCTATCATTCACCGTTGCAACACCTTATCATCATCCTCTGCTTCTACCCTTCAATTTCAGTGTCCATTCTCCCTTTCTTTCCGCTCTCATACTCATAGAAGAAGACACCTTTCCCTTCGTGCCTTCGATTCTTCCTCCGAACCCAAAACCGAAGAAGAAAATGAAGAAGGTTCCGTTGTTAACAGTCAAAATGTTAAGATTGCTGACGAGGATTATCCGAGTGGCGAATTCGAATTTGAACCAATTACCGGATGGAGAAACTTACTCGTCAAGCTTAAGATGCTCGTCGCGTTCCCATGGGAGCGTGTTCGCAAAGGCAGTGTACTCACCATGAAGCTTCGTGGCCAGATATCTGATCAAGTCAAGAGCAGGTTCTCTCCGGGACTTTCTCTACCCCAAATTTGTGAGAATTTTTTGAAAGCAGCTTACGATCCTCGTATTTCTGGGATCTATCTTCATATTGATAGCTTAAATTGCGGGTGGGGTAAAGTTGAAGAAATTCGAAGGCACATATTGAATTTCAAAAAATCAGGAAAATTTGTTGTGGCTTATGTCCCGACATGTCAAGAAAAAGAATATTACCTTGCGTGTGCATGTGAAGAGATATATGCCCCTCCAAGTGCTTACTTTTCTTTGTTCGGATTGACTGTTCAAGCCTCATTCCTCAGAGGTGTTTTAGATAACATAGGAATTGAACCACAAGTGGAAAGGATTGGCAAATACAAAAGTGCAGGAGATCAGCTAGCTCGAAGAACCATTTCTGAAGAAAATTGTGAGATGCTGACTGCATTGCTTGATAACATCTATACAAATTGGCTGGATAAAGTCTCTTCTGCCAAAGGAAAGAGAAGAGAAGATATTGAGAACTTCATAAATGAAGGTGTTTATCAAGTTGACAAGCTTAAAGAAGAGGGCCTCATATCAAATATAATCTATGATGATGAGGTTATTGCCATGTTGAAGGAGAGACTTGGAGTGAAAACAGATAAAAATCTGCCAATGGTAGATTACAGGAAATACTCTCGTGTTAGGAAATGGACAGTTGGAATGTCAGGCGGTAAAGATCTGATAGCCATTATCCGAGCCTCAGGGAGCATTAGTCGTGTTGAAAGTCAATTAAGTGTCTCTAGCTCAGGAATCACTGCAGAGAAGTTCATTGAGAAGATTCGCAGTGTCAGAGAGTCGAAAAAATTTAAGGCTGCTATCATCAGAATTGACAGTCCTGGAGGTGATGCTCTTGCTTCTGATTTGATGTGGAGGGAAATCCGGCTTTTGGCTGCTTCAAAACCAGTCATTGCTTCGATGTCCGACGTGGCAGCAAGTGGAGGATACTACATGGCAATGGGAACTGAAGCAATTGTTGCAGAAAGTCTTACCTTAACTGGTTCAATTGGAGTGGTCACAGGAAAATTTAACCTTGAGAAACTGTATGAGAAGATTGGCTTTAACAAAGAAATCATATCAAGGGGAAGATATGCTGAGCTCCTTGCTGCTGAACAACGTTCTTTTAGACCAGATGAAGCAGAGCTATTTGCCAAATCTGCACAGCATGCTTATAAACAATTTCGAGACAAAGCAGCTTTGTCCAGATCAATGACTGTGGATAAGATGGAGGAGGTCGCACAGGGGAGGGTTTGGACTGGTAAAGATGCAGCTTCACGTGGTTTGGTTGATGCTATTGGTGGGCTTTCTCGAGCTATTGCCATAGCAAAGTTGAAGGCCAATATACCACAAGACAGCCAGGTTACTGTTGTGGAGATCTCCAGACCTAGCCCTTCTCTACCTGAGATTTTATTAGGCGTAGGGAATTCCCTCGTTGGAGTAGACAGAACATTGAAGGAATTGCTACAGGGCTTGACATTTTCTGATGGAGTTCAAGCCCGGATGGATGGAATCATGTTTCAGACATTAGAAGGAAGTCCTTACACCAACCCCATTTTGTCGATAATAAAAGATTACCTCAGTTCCCTGTAA 2010 0.4259 MSTLLLPSPPLTSIIHRCNTLSSSSASTLQFQCPFSLSFRSHTHRRRHLSLRAFDSSSEPKTEEENEEGSVVNSQNVKIADEDYPSGEFEFEPITGWRNLLVKLKMLVAFPWERVRKGSVLTMKLRGQISDQVKSRFSPGLSLPQICENFLKAAYDPRISGIYLHIDSLNCGWGKVEEIRRHILNFKKSGKFVVAYVPTCQEKEYYLACACEEIYAPPSAYFSLFGLTVQASFLRGVLDNIGIEPQVERIGKYKSAGDQLARRTISEENCEMLTALLDNIYTNWLDKVSSAKGKRREDIENFINEGVYQVDKLKEEGLISNIIYDDEVIAMLKERLGVKTDKNLPMVDYRKYSRVRKWTVGMSGGKDLIAIIRASGSISRVESQLSVSSSGITAEKFIEKIRSVRESKKFKAAIIRIDSPGGDALASDLMWREIRLLAASKPVIASMSDVAASGGYYMAMGTEAIVAESLTLTGSIGVVTGKFNLEKLYEKIGFNKEIISRGRYAELLAAEQRSFRPDEAELFAKSAQHAYKQFRDKAALSRSMTVDKMEEVAQGRVWTGKDAASRGLVDAIGGLSRAIAIAKLKANIPQDSQVTVVEISRPSPSLPEILLGVGNSLVGVDRTLKELLQGLTFSDGVQARMDGIMFQTLEGSPYTNPILSIIKDYLSSL* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00403 669 Gene3D - 364 513 - -
Rops10g00403 669 SUPERFAMILY ClpP/crotonase 366 574 IPR029045 -
Rops10g00403 669 Gene3D - 118 354 - -
Rops10g00403 669 MobiDBLite consensus disorder prediction 51 68 - -
Rops10g00403 669 Pfam Peptidase family S49 186 338 IPR002142 GO:0006508|GO:0008233
Rops10g00403 669 Pfam Peptidase family S49 437 587 IPR002142 GO:0006508|GO:0008233
Rops10g00403 669 PIRSF Protease_4_SppA 52 668 IPR004634 GO:0006465|GO:0008233|GO:0016020
Rops10g00403 669 Gene3D - 514 635 - -
Rops10g00403 669 PANTHER PROTEASE 4 75 668 - -
Rops10g00403 669 NCBIfam signal peptide peptidase SppA 369 582 IPR004635 GO:0006508|GO:0008233
Rops10g00403 669 CDD S49_Sppa_N_C 369 583 IPR047272 -
Rops10g00403 669 SUPERFAMILY ClpP/crotonase 110 327 IPR029045 -
Rops10g00403 669 MobiDBLite consensus disorder prediction 51 74 - -
Rops10g00403 669 CDD S49_SppA_67K_type 121 334 IPR047217 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00403 Rops-Chr10 11201673 11212224 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00403 K04773 - gmx:100781522 1093.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03777 2 69668482 69676360 Rops10g00403 10 11201673 11212224 PCT