Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03406 ATGAAAGCTGCCACTAAAAGACCGTTCTTCATATTCTCATGCCTCCTTCTCCTCCTCTGCACCACCGCTGAAGAAGGCTTCAATGAAGCACCAAAATTCTACAACTCCCCAACATGTGCCACCATTGATCACCACCACCACCACACAAATCACACGTGCTCAAACGACGTCGTACATGTGGCAATGACCCTCGACGTTTCTTATCTCCGTGGCTCCATGGCGGCGATCCTATCCGTTCTTCAACATTCCTCATGTCCTGAAAATATTGTCTTCCACTTTGTCACCGCCGCTTCAAAACCTTCCTCCACCGCCATCCTCAACCGCACACTCACCGCCACATTCCCATACCTGAAATTCCAAATCTACCCCTTTGACGACGGCGCCGTCGCCGGACTCATCTCAACCTCCATTCGCTCAGCCCTTGATTGCCCTCTTAATTACGCTCGGAGCTACCTCGCCGAACTCCTCCCTCAGTGCGTCACCAAAATCATTTACCTTGACTCCGACTTGGTCCTCGTCGACGACATTGCCAAGCTCGCCGCTACTCCTCTTCGTTCCGACACCGTCCTCGCCGCGCCGGAATACTGCACTGCAAACTTCACCGCTTACTTTACGCCGTCGTTTTGGTCAAACCCTTCTCTGTCACTCACCTTTGCGAACCGTCGGCCTTGCTACTTCAACACCGGCGTCATGGTCATTGACCTCCGTCGGTGGCGGGCCGGCGACTATACCACGTTGATCCGGGAATGGATGGAACTTCAGAAGAGAATGCGGATCTACGAGCTGGGTTCGTTGCCTCCTTTTTTGTTGGTTTTTGCTGGGAAGATTACGCCGGTGGATCACCGGTGGAACCAGCACGGGCTCGGTGGTGACAATTTTCGTGGGCTTTGTCGTGAATTGCATCCGGGCCCGGTGAGCTTGCTTCATTGGAGTGGAAAGGGAAAGCCGTGGGCCCGGCTCGATGCTAACAGGCCTTGCCCATTGGATGCTTTATGGGCTCCCTATGATCTGCTAAAAACTCCTTTCCCTCTGGAGGCGTAA 1041 0.537 MKAATKRPFFIFSCLLLLLCTTAEEGFNEAPKFYNSPTCATIDHHHHHTNHTCSNDVVHVAMTLDVSYLRGSMAAILSVLQHSSCPENIVFHFVTAASKPSSTAILNRTLTATFPYLKFQIYPFDDGAVAGLISTSIRSALDCPLNYARSYLAELLPQCVTKIIYLDSDLVLVDDIAKLAATPLRSDTVLAAPEYCTANFTAYFTPSFWSNPSLSLTFANRRPCYFNTGVMVIDLRRWRAGDYTTLIREWMELQKRMRIYELGSLPPFLLVFAGKITPVDHRWNQHGLGGDNFRGLCRELHPGPVSLLHWSGKGKPWARLDANRPCPLDALWAPYDLLKTPFPLEA* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03406 346 Pfam Glycosyl transferase family 8 59 319 IPR002495 GO:0016757
Rops2g03406 346 FunFam Hexosyltransferase 59 326 - -
Rops2g03406 346 SUPERFAMILY Nucleotide-diphospho-sugar transferases 58 338 IPR029044 -
Rops2g03406 346 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 59 326 IPR029044 -
Rops2g03406 346 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 13 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03406 Rops-Chr2 62607776 62609141 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03406 25 344 Glycosyltransferase AT3G50760 72.446 1.95e-175 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03406 K20893 - gmx:100783054 556.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03406 2 62607776 62609141 Rops2g03406 2 62607776 62609141 ECH
Rops2g03406 2 62607776 62609141 Rops1g01696 1 35642331 35643598 ECH
Rops1g01696 1 35642331 35643598 Rops2g03406 2 62607776 62609141 PCT