Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01696 ATGATGGAAATTCGCAGTGCCTTCCATTTCTTCTGTATCTTCCTTCTCTTCGTTACTCATGCCACGTGCAACCCTCAACGCTTCAAACAAGCCCCAAAATTCTACAACTCCCCCAACTGTGCCACCATTGACCTGAAACCCACCGACATGTGCTCCGACAACGCAGTACACGTGGCCATGACATTAGACATCACTTACCTTCGTGGTTCCATGGCCGCAATCCTCTCCGTTCTCCAACACTCCTCCTGTCCGGAAAACATCATCTTCCATTTCGTCACCGCCGCATCGAAAGCCTCCTCCGCCACTGTCCTCAACCGCACACTCTCCATCTCGTTCCCATATTTAAGATTCCAAATCTACCCCTTCGATGACGACACCGTTTCGGGACTCATCTCTACATCCATCCGTTCCGCACTTGATTGCCCACTCAATTATGCACGCAACTACATGGCCAACCTCCTCCCCACGTGTGTCGGTAAAATCGTGTACCTCGACTCCGACCTCGTACTTGTCGATGATATTGCCAAGCTCGCAGCCACGCCACTCCCAAACGACGCCGTTCTTGCCGCACCTGAATATTGCAACGCAAACTTCAGCGCTTACTTTACTCCCACGTTCTGGTCCAACCCTTCTCTGTCTCTAACCTTTGCCGGCCGCAAGCCGTGTTATTTCAACACCGGCGTCATGGTCATCGACCTTGAACGGTGGCGTGCCGGGGACTATACTACCAAGATCCAGGAATGGATGGAGCTTCAGAAGAGAATGCGGATCTACGAGCTGGGCTCATTACCGCCCTTTCTTCTTGTTTTTGCCGGAAATATAGCCCTAGTGGATCACCGGTGGAATCAGCACGGACTCGGCGGCGATAACTTCCGTGGGCTTTGTAGGGATTTACATCCGGGCCCGGTGAGCCTACTGCATTGGAGTGGGAAGGGGAAGCCGTGGGCCAGGCTCGACGCTAATCGTCCTTGTCCTTTGGATGCGTTATGGGCTCCCTATGATCTTCTTGAGATACCTTTCGCTCTTGAGGCCTAG 1035 0.5285 MMEIRSAFHFFCIFLLFVTHATCNPQRFKQAPKFYNSPNCATIDLKPTDMCSDNAVHVAMTLDITYLRGSMAAILSVLQHSSCPENIIFHFVTAASKASSATVLNRTLSISFPYLRFQIYPFDDDTVSGLISTSIRSALDCPLNYARNYMANLLPTCVGKIVYLDSDLVLVDDIAKLAATPLPNDAVLAAPEYCNANFSAYFTPTFWSNPSLSLTFAGRKPCYFNTGVMVIDLERWRAGDYTTKIQEWMELQKRMRIYELGSLPPFLLVFAGNIALVDHRWNQHGLGGDNFRGLCRDLHPGPVSLLHWSGKGKPWARLDANRPCPLDALWAPYDLLEIPFALEA* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01696 344 Pfam Glycosyl transferase family 8 57 317 IPR002495 GO:0016757
Rops1g01696 344 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 57 323 IPR029044 -
Rops1g01696 344 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 10 337 - -
Rops1g01696 344 SUPERFAMILY Nucleotide-diphospho-sugar transferases 56 336 IPR029044 -
Rops1g01696 344 FunFam Hexosyltransferase 57 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01696 Rops-Chr1 35642331 35643598 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g01696 4 342 Glycosyltransferase AT3G50760 71.053 0.0 504
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01696 K20893 - gmx:100783054 575.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g01696 1 35642331 35643598 Rops1g01696 1 35642331 35643598 ECH
Rops2g03406 2 62607776 62609141 Rops1g01696 1 35642331 35643598 ECH
Rops1g01696 1 35642331 35643598 Rops2g03406 2 62607776 62609141 PCT