Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03397 ATGAGTAGTGCCGTGAATCTGAACACATGGGCACGCCCTAGTTTCATTTTCAACCAAACCACCATATCCAGATCCAGATCCCCAATTTTTTATCACTGCCATGGCCTAAAAAAACTACCCAATTCGTCCTTTAACTTTGCAAAACCGCAAAGGCATCAACTTTGTTCTTCTTCTGTGATGGGCATTTCTGCAGTGCTCACCAAAGAGGACACATTGGAAGCGGAAGAGAAACCCGCTTTCAATTTTAAGTCTTATATGGTTGAAAAGGCGAGTAGGGTTAACAAGGCCCTAGACGACGCCGTTTCGCTAAGGGAACCGTTGAAGGTTCATGAGGCCATGAGATATTCCCTCCTCGCCGGCGGGAAGAGAGTCCGGCCGGTTCTCTGCGTCGCCGCCTGCGAAATCGTCGGAGGAACCGAGTCCATGGCGATGCCGGCGGCGTGCGCCATAGAGATGATCCACACCATGTCTTTAATCCATGACGACCTTCCCTGCATGGACAACGACGATCTCCGGCGTGGGAAACCGACGAATCACAAGGTGTTCGGCGAGGACGTGGCGGTACTCGCCGGCGACGCGCTTCTCGCCTTCGCCTTCGAGCACATCGCCGTCTCCACGGCGGGGGTCTCGTCGGTGAGGATAGTCCGGGCGATCGGAGAACTCGCTAAGTGCATCGGCTCGGAAGGCCTCGTCGCCGGCCAAGTCGTCGACATAAATTCCGAAGGTTTATCCGATGTGGGACTTGAGAGGCTAGAGTTCATTCACCTTCATAAAACGGCAGCGTTGCTTGAAGGTGCTGTTGTTCTTGGTGCCATTCTTGGTGGTGGTTCTGATGAAGATGTTGAGAGGTTGAGAAAGTTTGCTAGGTACATAGGGTTGTTGTTTCAGGTGGTTGATGATATTCTTGACGTTACAAAGTCTTCACAAGAATTGGGGAAAACAGCAGGGAAGGACTTGGTGGCTGATAAGGTTACTTACCCTAAGCTTTTAGGGATAGAGAAATCCAAGGAGTTTGCTGAGAAGTTGAATCAGGATGCACAAGAACAGCTCTCTGTGTTTGATCCTCATAAGGCTGCTCCTTTGATTGCTTTAGCCAATTACATTGCTTACAGGCAAAACTAG 1122 0.5045 MSSAVNLNTWARPSFIFNQTTISRSRSPIFYHCHGLKKLPNSSFNFAKPQRHQLCSSSVMGISAVLTKEDTLEAEEKPAFNFKSYMVEKASRVNKALDDAVSLREPLKVHEAMRYSLLAGGKRVRPVLCVAACEIVGGTESMAMPAACAIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAVSTAGVSSVRIVRAIGELAKCIGSEGLVAGQVVDINSEGLSDVGLERLEFIHLHKTAALLEGAVVLGAILGGGSDEDVERLRKFARYIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLLGIEKSKEFAEKLNQDAQEQLSVFDPHKAAPLIALANYIAYRQN* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03397 373 ProSitePatterns Polyprenyl synthases signature 2. 291 303 IPR033749 -
Rops2g03397 373 Pfam Polyprenyl synthetase 109 344 IPR000092 GO:0008299
Rops2g03397 373 ProSitePatterns Polyprenyl synthases signature 1. 158 174 IPR033749 -
Rops2g03397 373 Gene3D Farnesyl Diphosphate Synthase 79 373 IPR008949 -
Rops2g03397 373 PANTHER FARNESYL DIPHOSPHATE SYNTHASE 37 373 - -
Rops2g03397 373 SFLD Polyprenyl Transferase Like 85 371 - -
Rops2g03397 373 CDD Trans_IPPS_HT 109 371 IPR000092 GO:0008299
Rops2g03397 373 FunFam Geranylgeranyl diphosphate synthase 79 373 - -
Rops2g03397 373 Coils Coil 329 349 - -
Rops2g03397 373 SUPERFAMILY Terpenoid synthases 82 353 IPR008949 -
Rops2g03397 373 SFLD Isoprenoid Synthase Type I 85 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03397 Rops-Chr2 62451800 62453388 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03397 K13789 - gmx:100785539 557.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03397 2 62451800 62453388 Rops2g03397 2 62451800 62453388 ECH
Rops2g03397 2 62451800 62453388 Rops1g01691 1 35587278 35588587 ECH
Rops1g01691 1 35587278 35588587 Rops2g03397 2 62451800 62453388 PCT