Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01691 ATGGTTCCCATTACCTCCGTTACCCTGAAACAAGGAAGAAACGCTATTTCTTCTTCTTCCTCTCTCGTCGTCTCTGCGATTCTCACTAAGGTGGAAACTGTCAGAGACGAAGAACCTGAACCCAACTTCAATTTCGAGGCCTACATGCTTGAAAAGGCCAACACAGTGAACAAAGCTTTGGACGAAGCTATTGTCATGAACGAACCGGAGAAGATTCACGAAGCCATGAGATACTCCCTCCTCGCCGGCGGTAAGCGTGTCCGACCGGTGCTCTGCATCGCCGCCTGCGAACTCGTCGGCGGCAACGAAGAAAAGGCGATCCCCGCCGCGTGCGCCGTCGAGATGATCCACACCATGTCACTCATTCACGACGATTTGCCTTGCATGGACAACGATGATCTCCGGCGAGGAAAGCCGACCAACCACAAGGTTTTCGGCGAGCACGTCGCGGTCCTCGCCGGCGATGCTCTTCTTTCCTTAGCCTTCGAGAAAATTGCGTTGACGACGGAGGAAGTACCGGCGGCAAGGGTGGTTCGTGCGATTGCTGAGCTGGCAAAAGCGATAGGTAAGGAAGGGTTAGTTGCAGGGCAAGTAGTGGATATTGATTCAGAAGGGTTATCGAATGTGAGTTTGGAGAGGCTTGAGTTCATTCATCTTCACAAAACTGGGGCTTTGTTGGAAGCTGCGGTTGTGTTGGGAGCAATAATGGGTGGTGGGTCTGATGAAGAAGTTGAGAGGTTAAGGAATTTTGCTAGGTGCATTGGGTTGTTGTTTCAGGTTGTGGATGATATTCTTGATATTACTAAGTCATCTGAGGAATTGGGGAAGACTGCAGGGAAGGACTTGGTGGCTGATAAGGTCACATACCCTAAACTTTTGGGGATAGAAAAATCTATGGAGTTTGCTGCCAAATTGAACAATGATGCACGTGACCACCTGGTTGGGTTTGACCCGGAAAAGGCTGCTCCATTGTTTGCTTTAACCAATTACATTAATTATAGGCAAAACTAA 1011 0.4926 MVPITSVTLKQGRNAISSSSSLVVSAILTKVETVRDEEPEPNFNFEAYMLEKANTVNKALDEAIVMNEPEKIHEAMRYSLLAGGKRVRPVLCIAACELVGGNEEKAIPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEHVAVLAGDALLSLAFEKIALTTEEVPAARVVRAIAELAKAIGKEGLVAGQVVDIDSEGLSNVSLERLEFIHLHKTGALLEAAVVLGAIMGGGSDEEVERLRNFARCIGLLFQVVDDILDITKSSEELGKTAGKDLVADKVTYPKLLGIEKSMEFAAKLNNDARDHLVGFDPEKAAPLFALTNYINYRQN* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01691 336 CDD Trans_IPPS_HT 68 334 IPR000092 GO:0008299
Rops1g01691 336 ProSitePatterns Polyprenyl synthases signature 1. 121 137 IPR033749 -
Rops1g01691 336 PANTHER FARNESYL DIPHOSPHATE SYNTHASE 31 336 - -
Rops1g01691 336 ProSitePatterns Polyprenyl synthases signature 2. 254 266 IPR033749 -
Rops1g01691 336 FunFam Geranylgeranyl diphosphate synthase 42 336 - -
Rops1g01691 336 SFLD Polyprenyl Transferase Like 47 334 - -
Rops1g01691 336 Pfam Polyprenyl synthetase 70 300 IPR000092 GO:0008299
Rops1g01691 336 SFLD Isoprenoid Synthase Type I 47 334 - -
Rops1g01691 336 Gene3D Farnesyl Diphosphate Synthase 38 336 IPR008949 -
Rops1g01691 336 SUPERFAMILY Terpenoid synthases 47 313 IPR008949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01691 Rops-Chr1 35587278 35588587 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01691 K13789 - zju:107424859 489.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g01691 1 35587278 35588587 Rops1g01691 1 35587278 35588587 ECH
Rops2g03397 2 62451800 62453388 Rops1g01691 1 35587278 35588587 ECH
Rops1g01691 1 35587278 35588587 Rops2g03397 2 62451800 62453388 PCT