Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03362 ATGGTGAACCTGGTGGCAGCACAGAGGCCATTAATGCATGGACTAATGAAAATGGCAGGGATAAGACCCTACACGGTGGAGATAGAACCAGGGACAGTGATGAGTTTCTGGGTACCTTCCGATACCATCACAAAGCCCAAGAAAAAAGACGAAAAGCCCAAAGTAACTTCCAAGCCGAACAAGCCCACGGTTGTTCTAATCCACGGTTTCGCTTCCGAGGGAATAGTGACGTGGCAGTTCCAAGTTGGCGCGTTAACCAAAAAGTACGCTGTTTATGTTCCGGATCTTCTATTCTTCGGAGGTTCCACCACCGATAAAGCTGAAAGGTCACCAACTTTTCAAGCGGAGTGTTTGGCAACAGCGTTAAGGAAACTTGGGGTTGAAAAATGCATAGTGGTTGGGTTCAGTTATGGTGGAATGGTGGCTTTTAAGATGGCTGAGATGTACCCTGAGTTGGTCCAAGCTATGGTTATTTCTGGTTCCATTTTGGCTATGACTGATTCCATTAGTGTGACCTCATTGCAAGAGCTTGGGTTTTCTTCTTCTTCTGAGCTTTTGTTGCCTACATCTGTTAAGGGTCTTAAGGCCCTTTTGTCTGTTGCTGCATACAAAAAGCTATGGTTTCCGGATCGTTTACACAAGGACTTTCTTGAGGTGATGTTCACGAATAGGAAGGAGCGAGGTGAGTTATTGGAGGGTTTGGTAATTAGCAACAGAGACATTAACATCCCAAATTTTCCGCAGAGGATACATCTTCTATGGGGCGAGAATGATCAAATTTTCAAACTGGAGCTTGCACAAAATATGAAAGAGCAATTAGGAGAAAACACAACGTTTCAAGGCATAAAGAAAGCTGGTCACCTGGTTCACTTGGAGCGACCATGTGTCTACAATAGATGCCTGAAGCAGGTCATTGCTTCATTCTTGGCTTCAAATGAAGCCAAAAAATAA 951 0.4427 MVNLVAAQRPLMHGLMKMAGIRPYTVEIEPGTVMSFWVPSDTITKPKKKDEKPKVTSKPNKPTVVLIHGFASEGIVTWQFQVGALTKKYAVYVPDLLFFGGSTTDKAERSPTFQAECLATALRKLGVEKCIVVGFSYGGMVAFKMAEMYPELVQAMVISGSILAMTDSISVTSLQELGFSSSSELLLPTSVKGLKALLSVAAYKKLWFPDRLHKDFLEVMFTNRKERGELLEGLVISNRDINIPNFPQRIHLLWGENDQIFKLELAQNMKEQLGENTTFQGIKKAGHLVHLERPCVYNRCLKQVIASFLASNEAKK* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03362 316 PRINTS Alpha/beta hydrolase fold signature 88 103 IPR000073 -
Rops2g03362 316 PRINTS Alpha/beta hydrolase fold signature 146 159 IPR000073 -
Rops2g03362 316 PRINTS Alpha/beta hydrolase fold signature 132 145 IPR000073 -
Rops2g03362 316 PRINTS Alpha/beta hydrolase fold signature 250 264 IPR000073 -
Rops2g03362 316 PANTHER SI:DKEY-122A22.2 1 306 - -
Rops2g03362 316 SUPERFAMILY alpha/beta-Hydrolases 59 305 IPR029058 -
Rops2g03362 316 Pfam alpha/beta hydrolase fold 62 173 IPR000073 -
Rops2g03362 316 Gene3D alpha/beta hydrolase 15 310 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03362 Rops-Chr2 61843372 61847675 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03362 51 171 Acyl Lipid Metabolism Gene Families AT4G15960 27.778 1.51e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03362 - - gmx:100816070 541.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03362 2 61843372 61847675 Rops1g01645 1 34822569 34832195 ECH
Rops2g03362 2 61843372 61847675 Rops2g03362 2 61843372 61847675 ECH
Rops1g01645 1 34822569 34832195 Rops2g03362 2 61843372 61847675 PCT