Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01645 ATGGTGAACCTGGTGACAGCCTATTGGTCATTGTTGCGTTGGGCGATGAAGATGGCGGGGGTGAGGCCCTACACGGTGGAGATACAGCCAGGAACTGTCATGAGATTCTGGGTGCCTTCTGAGACCATTTCCAAGCCCAAACTCATTTCTAAACCCAGCAAGCCAGTGGTGGTTCTCCTCCACGGCTTCTGTGGTGACGGAATCATGACGTGGCAGTTCCAAGTTGGCGCTTTAACCAAAAAATACGCTGTTTACGTGCCGGACTTCCTCTTCTTTGGCGGCTCCGGCAGCGACAAACCGGAGCGGTCACCGACTTTTCAAGCGGAGTGTTTGGCTGTGGGGTTAAGGAAGCTTGGGGTGGAGAAATGCGTTGTGGTTGGGTTCAGCTATGGAGGGTTCGTGGCATTTAAGATGGCTGAGCTCTACGTAGAGTTGGTCCAAGCTATTGTCGTATCTGGTGCCGTTGTGGCAATTATGGACTCGATTATTGCCACCGCAGTACAAGGAGTTGGGTTTTCTTCGTGTTCTGAGATGTTATTGCCAACCACCGTTAAGGGAGTGAAGACCCTTCTCTCTGTTGGCGTTCACAGAAACCTCTGGTTTCCCAACCGTCTACACACAGACTTTCTTGAGGTGATGTTCTCGAATAGGAAGGAGCGAGAAGAGCTGTTAGAGGCCTTAGTCATTAGCTATAAAGACATCAACATCCCAAAATTTCCGCAGCGAATACATCTTTTATGGGGCGAAAACGATAAAATCTTCAAATTAGAGCTTGCGCAGAGCATGAAAGAGAAGCTAGGAAAGAACGCAACATTTCAAGGCATAAAGAATGCTGGTCACCTGGTTCACCTGGAGCGACCCTGTGTCTATAATAGGTGCCTTCAGCAGTTTCTTTCTTCCGTCATGACTGGTGCAAAAAAATAA 924 0.4881 MVNLVTAYWSLLRWAMKMAGVRPYTVEIQPGTVMRFWVPSETISKPKLISKPSKPVVVLLHGFCGDGIMTWQFQVGALTKKYAVYVPDFLFFGGSGSDKPERSPTFQAECLAVGLRKLGVEKCVVVGFSYGGFVAFKMAELYVELVQAIVVSGAVVAIMDSIIATAVQGVGFSSCSEMLLPTTVKGVKTLLSVGVHRNLWFPNRLHTDFLEVMFSNRKEREELLEALVISYKDINIPKFPQRIHLLWGENDKIFKLELAQSMKEKLGKNATFQGIKNAGHLVHLERPCVYNRCLQQFLSSVMTGAKK* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01645 307 Gene3D alpha/beta hydrolase 47 303 IPR029058 -
Rops1g01645 307 Pfam alpha/beta hydrolase fold 55 159 IPR000073 -
Rops1g01645 307 SUPERFAMILY alpha/beta-Hydrolases 17 298 IPR029058 -
Rops1g01645 307 PANTHER SI:DKEY-122A22.2 1 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01645 Rops-Chr1 34822569 34832195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g01645 57 302 Miscellaneous Gene Families AT1G80280 23.297 2.07e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01645 - - mtr:11409564 456.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03362 2 61843372 61847675 Rops1g01645 1 34822569 34832195 ECH
Rops1g01645 1 34822569 34832195 Rops1g01645 1 34822569 34832195 ECH
Rops1g01645 1 34822569 34832195 Rops2g03362 2 61843372 61847675 PCT