Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03248 ATGGCTACTTCAAATCAATTTACTAGCACTCTCCTCTTTTTCTTTCTCTTTCATTTCCTAAGAGGTTCGAATTCAGCTACATTCACAATCGTAAACAAGTGCAGCTACCCTGTCTGGCCGGGAATTTTGTCCGGCGCCGGAACGGCACAGCTGGCCACGACGGGCTTCGCCCTGCAAACTGGCGAGTCCAACGCCGTTGCCATGCCGGCAGCCTGGTCGGGCCGCATATGGGGCCGGACTCTATGCTCCACGGACTCCACCGGGAAATTCTCCTGTGCCACCGGAGACTGTGGCTCCTCCACCGTAGAATGTGGCGGAAGCGGCGCAATCCCGCCGGCGACACTAGCGGAGTTCACCTTGAACGGTGCGGGGGGTATGGATTTCTACGACGTCAGCCTGGTCGATGGTTACAATCTCCCCATGGTGGTGGAGCCGAGCGGTGGAGGAAACTGCTCGGCGACGGGATGCGTGGTGGACTTGAACGGAGGGTGTCCGTCGGAGCTGAAGGTGAATATGGCGGTGGGAGGAGAAGAAAAGAGCGTGGCGTGCAAGAGCGCGTGTGAAGCTTTCGGAGATCCACGTTATTGTTGTAGTGGAGCTTATGCGACTCCTCAGACATGCAGGCCAAGTTCGTACTCGCAGTTCTTCAAGAGCGCGTGTCCACGCGCTTATAGCTACGCCTACGATGATGGCACCAGTATCTTTACTTGTGCCTCTGCGGATTACCTTATTACTTTCTGTCCCACACGCTCCAAAAGTTCGATCAAGTCAGGGAATGACAGATTCCCAGTAGCAGTGGAATTCTCAGTAGGCCAAGCCCATGCTAATGGGTCACCCAAGGTCATGGCGGTGGCCATTGGTATCGTTTTGGTGACAATTTGGTGGCAACTTAATTAG 897 0.5485 MATSNQFTSTLLFFFLFHFLRGSNSATFTIVNKCSYPVWPGILSGAGTAQLATTGFALQTGESNAVAMPAAWSGRIWGRTLCSTDSTGKFSCATGDCGSSTVECGGSGAIPPATLAEFTLNGAGGMDFYDVSLVDGYNLPMVVEPSGGGNCSATGCVVDLNGGCPSELKVNMAVGGEEKSVACKSACEAFGDPRYCCSGAYATPQTCRPSSYSQFFKSACPRAYSYAYDDGTSIFTCASADYLITFCPTRSKSSIKSGNDRFPVAVEFSVGQAHANGSPKVMAVAIGIVLVTIWWQLN* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03248 298 SUPERFAMILY Osmotin, thaumatin-like protein 26 248 IPR037176 -
Rops2g03248 298 SMART tha2 28 248 IPR001938 -
Rops2g03248 298 PIRSF PR5 1 285 IPR001938 -
Rops2g03248 298 ProSiteProfiles Thaumatin family profile. 25 248 IPR001938 -
Rops2g03248 298 FunFam THAUMATIN-LIKE PROTEIN 1 26 248 - -
Rops2g03248 298 Pfam Thaumatin family 32 248 IPR001938 -
Rops2g03248 298 CDD TLP-PA 27 247 - -
Rops2g03248 298 Gene3D Thaumatin 26 248 IPR037176 -
Rops2g03248 298 PRINTS Pathogenesis-related protein signature 75 86 IPR001938 -
Rops2g03248 298 PRINTS Pathogenesis-related protein signature 238 247 IPR001938 -
Rops2g03248 298 PRINTS Pathogenesis-related protein signature 27 39 IPR001938 -
Rops2g03248 298 PRINTS Pathogenesis-related protein signature 127 143 IPR001938 -
Rops2g03248 298 PANTHER OS03G0233200 PROTEIN 11 248 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03248 Rops-Chr2 59398833 59400962 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03248 7 249 Receptor kinase-like Gene Family AT5G38280 54.032 5.57e-90 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03248 - - gmx:100809419 478.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03248 2 59398833 59400962 Rops2g03248 2 59398833 59400962 ECH
Rops3g00433 3 5321917 5324518 Rops2g03248 2 59398833 59400962 ECH