Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01910 ATGGGGTCATACAAGGTTTCATTTTCAGTCTTCTGTGTCTTGGTGTTGGTCATAATGGTTCATGTTGGCTATGCCCAAGACTCACAAGCAGACTACGTCAATGCCCACAACGCTGCAAGGTCACAGGTCGGTGTTCCACCTTTAAAATGGGATGACACATTAGCTGCTTTCGCTCAAAATTATGCTGATCAACGTAAAGGTGACTGTGAACTTCAGCACTCAGGTGGACCTTACGGGGAGAACCTCGCATGGAGCAGTGGTGACCTAAGTGGTGATGATGCAGTGAGAATGTGGGTTGATGAGAAAGCCAACTATGATTACAATTCTAATTCCTGTAATGGGGTTTGTGGGCACTATACACAGGTGGTTTGGAGAAACTCAGTCCGTGTTGGATGTGCCAAAGTAAGGTGTGATAATGGAGGCACATTCATTGGTTGCAACTATGACCCTCGTGGCAACATTATTGGGCAAAAACCATACTAA 483 0.4555 MGSYKVSFSVFCVLVLVIMVHVGYAQDSQADYVNAHNAARSQVGVPPLKWDDTLAAFAQNYADQRKGDCELQHSGGPYGENLAWSSGDLSGDDAVRMWVDEKANYDYNSNSCNGVCGHYTQVVWRNSVRVGCAKVRCDNGGTFIGCNYDPRGNIIGQKPY* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01910 160 CDD CAP_PR-1 29 160 - -
Rops2g01910 160 FunFam Putative pathogenesis-related protein 1 26 160 - -
Rops2g01910 160 ProSitePatterns CRISP family signature 1. 117 127 IPR018244 GO:0005576
Rops2g01910 160 Gene3D CAP 22 160 IPR035940 -
Rops2g01910 160 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 31 157 IPR001283 -
Rops2g01910 160 Pfam Cysteine-rich secretory protein family 33 148 IPR014044 -
Rops2g01910 160 SMART SCP_3 27 156 IPR014044 -
Rops2g01910 160 PRINTS Allergen V5/Tpx-1 family signature 48 66 IPR001283 -
Rops2g01910 160 PRINTS Allergen V5/Tpx-1 family signature 143 156 IPR001283 -
Rops2g01910 160 PRINTS Allergen V5/Tpx-1 family signature 94 107 IPR001283 -
Rops2g01910 160 PRINTS Allergen V5/Tpx-1 family signature 116 132 IPR001283 -
Rops2g01910 160 ProSitePatterns CRISP family signature 2. 143 154 IPR018244 GO:0005576
Rops2g01910 160 SUPERFAMILY PR-1-like 11 160 IPR035940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01910 Rops-Chr2 29994925 29995519 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01910 K13449 - qsu:112017588 252.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g01910 2 29994925 29995519 Rops2g01910 2 29994925 29995519 ECH
Rops2g01910 2 29994925 29995519 Rops11g00385 11 5263463 5263946 PCT