Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00385 ATGGATCATGTTGCCTATGCTCAAGACTCACCACAAGACTACGTGAATGCCCATAACGCTGCAAGAGCAGAGGTGAGAGTTCCAAATTTGGTTTGGGATGAAACAGTTGCTACTTTTGCAAGGAACTATGCTAATCAACGTAAGGGTGATTGCAAACCGGTCCACTCAGGTGGTGGTGGGCGTTACGGGGAGAACCTGGCAATGAGCACTGGTGACCTAAGTGGAAGAGATGCAGTGAGATTGTGGGTGAATGAGAAAGCCAACTATGACTACAATTCTAACAAATGTGTTGGTGGGGAGTGTCTGCACTATACTCAGGTTGTTTGGAAGAACACAAAACGCGTTGGATGTGCCAAAGTGAGATGTAATAATGGAGGCACTTTCATCGGTTGTAACTATGACCCTCCTGGCAACTATGTTGGCCAAAGACCCTACTAA 438 0.4635 MDHVAYAQDSPQDYVNAHNAARAEVRVPNLVWDETVATFARNYANQRKGDCKPVHSGGGGRYGENLAMSTGDLSGRDAVRLWVNEKANYDYNSNKCVGGECLHYTQVVWKNTKRVGCAKVRCNNGGTFIGCNYDPPGNYVGQRPY* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00385 145 SMART SCP_3 9 141 IPR014044 -
Rops11g00385 145 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 10 142 IPR001283 -
Rops11g00385 145 ProSitePatterns CRISP family signature 2. 128 139 IPR018244 GO:0005576
Rops11g00385 145 Pfam Cysteine-rich secretory protein family 15 133 IPR014044 -
Rops11g00385 145 PRINTS Allergen V5/Tpx-1 family signature 101 117 IPR001283 -
Rops11g00385 145 PRINTS Allergen V5/Tpx-1 family signature 128 141 IPR001283 -
Rops11g00385 145 PRINTS Allergen V5/Tpx-1 family signature 30 48 IPR001283 -
Rops11g00385 145 PRINTS Allergen V5/Tpx-1 family signature 78 91 IPR001283 -
Rops11g00385 145 SUPERFAMILY PR-1-like 8 145 IPR035940 -
Rops11g00385 145 CDD CAP_PR-1 11 145 - -
Rops11g00385 145 FunFam Putative pathogenesis-related protein 1 8 145 - -
Rops11g00385 145 Gene3D CAP 9 145 IPR035940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00385 Rops-Chr11 5263463 5263946 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00385 K13449 - gmx:100806194 268.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g00385 11 5263463 5263946 Rops11g00385 11 5263463 5263946 ECH
Rops2g01910 2 29994925 29995519 Rops11g00385 11 5263463 5263946 PCT