Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01880 ATGGCTGGTACTGGTACTGGTACTGGAGGATACCCAGAAATGGCGACCACTGAGGAAGAGAAAGATGAGTCCCCAATCGAGGAAGTGCGGCTGACGGTGACCAACACCGACGACCCGACCCTTCCGGTGTGGACATTCCGGATGTGGTTTCTGGGTCTGGTTTCTTGCTCCCTGTTGTCGTTCCTTAACCAGTTCTTCGCGTACAGAACGGAGCCACTCATCATAACACAGATCACCGTCCAGGTTGCCACCCTTCCCCTCGGCCACCTCATGGCGGCGACCCTCCCCTCCACCACCTTCGGAATCCCCGGGTTCGGGTCGAAGCGATTCTCACTCAACCCGGGTCCATTCAACATGAAGGAGCACGTGCTCATTACTATATTCGCCAATGCTGGTAGCGCATTCGGGTCAGGGTCTCCTTACGCGGTTGGCATTGTTAACATTATCAAAGCTTTCTATGGAAGGAACATCACTTTTCTTGCTTCCTGGCTTCTCATCATCACTACTCAGGTGTTAGGATACGGGTGGGCGGGGTTGCTGAGAAAGTACGTGGTGGAGCCAGCTCATATGTGGTGGCCTAGCACCCTCGTTCAGGTTTCTCTTTTCAGAGCTTTGCATGAGAAAGATGATGACCACCGATTTTCAAGGGCAAAGTTTTTCTTCATTGCACTAGTTTGCAGTTTTTCTTGGTATCTGATCCCTGGATACTTCTTCTCAACCCTCACAAGCATATCATGGGTATGCTGGATATTCTCAAAGTCAGTAACAGCTCAGCAGATAGGTTCAGGCATGAATGGTTTAGGACTTGGAGCCCTTACACTTGATTGGTCTGCTGTGGCATCATTCTTGTTCAGCCCTCTAATCTCACCATTCTTTGCCATTGTCAATGTTTTTGTGGGCTATGCATTGATCGTCTATGTTGTGATTCCTATAGCATATTGGGGCCTCAATGTATACAGTGCAAATAAGTTCCCCATTTTCTCATCAGACTTGTTCACAGCTCAAGGCCAAGAATACAACATATCTGCTATTGTCAATGAAAAGTTTGAGCTTGATCTTGCAAAGTATCATGAACAAGGTCGAATTCATCTAAGTGTGTTCTTTTCTCTAACTTATGGATTTGGATTTGCCACCATAGCATCCACCATTTCACATGTTGCTTGCTTCTATGGAAGGGAGATTATGGAGCGGTATCGTGCTTCAGCAAAGGGTAAAGAAGATATCCACACAAAACTGATGAAAAAATACAAAGACATACCTTCTTGGTGGTTTTATGTGTTGCTGGGTGTGACGCTTGTGGTTTCTTTCATAATGTGCATCTTTCTAAATCACCAGATTCAGATGCCCTGGTGGGGACTTGTTTTTGCTTCAGCATTGGCCTTTATATTTACCCTCCCAATTAGCATCATAACTGCCACCACAAACCAGACACCAGGGTTAAATATCATTACCGAGTATCTCTTTGGTATCATTTACCCTGGAAGGCCAATAGCAAATGTATGCTTCAAAACCTACGGTTACATAAGCATGGCTCAGGCTGTCTCCTTCCTTAGCGATTTCAAGCTTGGGCACTACATGAAGATCCCTCCAAGGTCAATGTTCTTAGTTCAGTTCATTGGTACGGTGCTTGCTGGAACTATCAACATTGGTGTAGCATGGTGGCTGCTGAATTCCGTCCATAACATATGTCACAAAGATCTCCTTCCAGAAGGCAGTCCCTGGACATGTCCCAGCGACCGTGTTTTCTTTGATGCATCAGTTATTTGGGGTCTGGTAGGACCTAAGAGGATCTTTGGTTCTCAAGGAGACTACCAAGCAATGAACTGGTTTTTCCTTGGAGGTGCAATAGGGCCTATAATAGTTTGGCTATTGCATAAGGCATTCCCCAAGCAATCATGGATTCCCTTAATTAATCTTCCAGTCCTCCTTGGAGCAACTGGAATGATGCCCCCAGCAACAGCATTGAACTATAATGCATGGATTTTAGTTGGAACAATTTTCAACTTCTTTATCTTCCGTTACAGAAAGAAGTGGTGGCAGAGATACAACTATGTTCTATCAGCAGCACTTGATGCAGGGGTTGCTTTTATGGCTGTGTTGCTTTACTTTACACTAGGCTTGGAAAACATAAGTCTCAATTGGTGGGGAACTGCTGGTGAGCATTGTCCCCTTGCAACTTGCCCAACAGCTAAGGGTATAATGGTTGATGGTTGCCCTGTGAACTGA 2226 0.4573 MAGTGTGTGGYPEMATTEEEKDESPIEEVRLTVTNTDDPTLPVWTFRMWFLGLVSCSLLSFLNQFFAYRTEPLIITQITVQVATLPLGHLMAATLPSTTFGIPGFGSKRFSLNPGPFNMKEHVLITIFANAGSAFGSGSPYAVGIVNIIKAFYGRNITFLASWLLIITTQVLGYGWAGLLRKYVVEPAHMWWPSTLVQVSLFRALHEKDDDHRFSRAKFFFIALVCSFSWYLIPGYFFSTLTSISWVCWIFSKSVTAQQIGSGMNGLGLGALTLDWSAVASFLFSPLISPFFAIVNVFVGYALIVYVVIPIAYWGLNVYSANKFPIFSSDLFTAQGQEYNISAIVNEKFELDLAKYHEQGRIHLSVFFSLTYGFGFATIASTISHVACFYGREIMERYRASAKGKEDIHTKLMKKYKDIPSWWFYVLLGVTLVVSFIMCIFLNHQIQMPWWGLVFASALAFIFTLPISIITATTNQTPGLNIITEYLFGIIYPGRPIANVCFKTYGYISMAQAVSFLSDFKLGHYMKIPPRSMFLVQFIGTVLAGTINIGVAWWLLNSVHNICHKDLLPEGSPWTCPSDRVFFDASVIWGLVGPKRIFGSQGDYQAMNWFFLGGAIGPIIVWLLHKAFPKQSWIPLINLPVLLGATGMMPPATALNYNAWILVGTIFNFFIFRYRKKWWQRYNYVLSAALDAGVAFMAVLLYFTLGLENISLNWWGTAGEHCPLATCPTAKGIMVDGCPVN* 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01880 741 NCBIfam OPT family oligopeptide transporter 27 707 IPR004813 GO:0035673
Rops2g01880 741 NCBIfam small oligopeptide transporter, OPT family 21 710 IPR004648 GO:0055085
Rops2g01880 741 PANTHER ISP4 LIKE PROTEIN 17 740 IPR004648 GO:0055085
Rops2g01880 741 MobiDBLite consensus disorder prediction 1 26 - -
Rops2g01880 741 Pfam OPT oligopeptide transporter protein 44 704 IPR004813 GO:0035673
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01880 Rops-Chr2 29536717 29541170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01880 14 741 Organic Solute Cotransporters AT5G64410 80.548 0.0 1252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01880 - - gmx:100819886 1381.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g00345 11 4747454 4754647 Rops2g01880 2 29536717 29541170 PCT