Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00345 ATGAGCTTAGACACTGAGAAACCAACCACAACCACAACCTTAGACGAAGATGAAGAAGAAGTGTCTCCAATTGAAGAGGTTAAGTTAACCGTAACCAACACCGATGACCCGACCCAACCCGTCTGGACTTTCCGTATGTGGTTCTTGGGTCTCATCTCATGTTCCCTTTTATCCTTCTTAAACCAGTTTTTCGCTTATCGTACGGAGCCTCTCATCATAACACTCATCACCGTTCAGGTTGCTACCCTCCCCATTGGTCACTTCATGGCGGCAGTTCTACCCGCCACGAAGTTCACAATTCCCGGGTTCGGGTCTAAGCTATTTTCCTTCAACCCGGGTCCGTTTAACATGAAGGAGCATGTTCTTATTACCATATTCGCCAATGCTGGGAGTGCATTCGGATCCGGATCGCCCTATGCGGTGGGTATTGTTAATATAATAAAAGCCTTTTATGGACGAAGCATCTCCTTTTATGCTTCTTGGCTTCTCATCATTACCACTCAGGTGCTAGGTTATGGATGGGCCGGGTTGCTGAGAAAGTACGTGGTGGAACCGGCCCATATGTGGTGGCCCAGTACCCTAGTCCAGGTCTCACTTTTCCGAGCTTTGCATGAGAAAGATGACCGTAGACTTTCAAGGGCAAAGTTTTTCTTTATTGCACTAGTGTGCAGTTTTTCATGGTATGTGATCCCTGGATACTTCTTCTCAACACTCACAAGCATATCATGGGTCTGTTGGGTATTCCCCAAATCAGTCACAGCTCAACAACTAGGATCAGGCATGAAAGGCCTTGGACTTGGAGCCCTCACACTTGATTGGAGTGTTGTTGCTTCATTCTTGTTCAGCCCTCTTGTCTCACCCTTCTTTGCCATTGCCAATGTTTTTGTGGGATATTCATTAATAGTCTATGTTGTGATTCCTATAGCATATTGGGGCCTAAATGTGTACAATGCAAATAGGTTTCCCATTTTCTCCTCTCACTTGTTCACAGCACAAGGTCAAAAGTACAACATATCTGCTATTGTCAATGACAAGTTCGAGCTAAATGTTGAAGAGTATAGAAAGCAAGGTAGAATTCATCTCAGTGTGTTTTTTGCTCTCACTTACGGCTTTGGATTTGCCGCCGTAGCATCCACCCTTACTCATGTTGTTTGCTTCTATGGAAGGGAGATTATGGAGCGCTATCGTGCTTCTTCCAAGGGCAAAGAAGATATCCACACAAAATTGATGAAAAGATACAAAGACATACCTTCTTGGTGGTTTCATGGGTTACTAGTTGTGACACTTGCAGTTTCTCTCGCACTATGCATCTTTCTAAATGACCAGGTTCAGATGCCGTGGTGGGGACTTCTCTTTGCTGCAGCCCTGGCTTTTGTATTTACACTCCCCATTAGCATCATAACTGCCACCACAAACCAGACACCAGGATTGAATATCATCACCGAGTATGTCTTCGGTCTCGTTTACCCTGGCAGACCAATAGCAAATGTATGCTTCAAAACCTATGGTTACATTAGCATGGCGCAGGCTGTCTCCTTCCTCAGTGATTTCAAGCTTGGACACTACATGAAAATCCCTCCAAGATCAATGTTCTTAGTTCAGTTCATAGGTACAATTCTTGCTGGAACCATCAACATTGGGGTAGCATGGTGGTTGCTGAACTCTATTGAAAATATATGTCATGATGATCTTCTTCCCGCAGGAAGTCCCTGGACATGTCCAGGTGACCGTGTTTTCTTTGATGCATCAGTTATTTGGGGTCTTGTAGGACCAAGAAGGATCTTTGGTTCTCAAGGAAACTACAGTACAATGAATTGGTTTTTCCTTGGAGGTGCATTAGGACCCATAATTGTTTGGCTATTGCATAAAGCATTTCCCAAACAGTCATGGATTCCACTAATTAACCTTCCGGTTCTCCTTGGAGCAACTGCAGCGATGCCACCAGCAACAGCATTGAACTACAATGCTTGGATTTTCGTTGGAACAATCTTCAACTTCTTTATCTTCCGTTATAGAAAGAGATGGTGGCAGAGATACAACTATGTTCTATCAGCAGCACTGGATACTGGGGTTGCTTTTATGACTGTGTTGTTGTACTTTTCACTTAGTTTGGAAAACAAAAGTATTACTTGGTGGGGTACTGATGGTGAACATTGTCCACTTGCATCTTGTCCAACAGCAAAGGGCATCATGGTTGATGGTTGCCCAGCAAACTAG 2217 0.4411 MSLDTEKPTTTTTLDEDEEEVSPIEEVKLTVTNTDDPTQPVWTFRMWFLGLISCSLLSFLNQFFAYRTEPLIITLITVQVATLPIGHFMAAVLPATKFTIPGFGSKLFSFNPGPFNMKEHVLITIFANAGSAFGSGSPYAVGIVNIIKAFYGRSISFYASWLLIITTQVLGYGWAGLLRKYVVEPAHMWWPSTLVQVSLFRALHEKDDRRLSRAKFFFIALVCSFSWYVIPGYFFSTLTSISWVCWVFPKSVTAQQLGSGMKGLGLGALTLDWSVVASFLFSPLVSPFFAIANVFVGYSLIVYVVIPIAYWGLNVYNANRFPIFSSHLFTAQGQKYNISAIVNDKFELNVEEYRKQGRIHLSVFFALTYGFGFAAVASTLTHVVCFYGREIMERYRASSKGKEDIHTKLMKRYKDIPSWWFHGLLVVTLAVSLALCIFLNDQVQMPWWGLLFAAALAFVFTLPISIITATTNQTPGLNIITEYVFGLVYPGRPIANVCFKTYGYISMAQAVSFLSDFKLGHYMKIPPRSMFLVQFIGTILAGTINIGVAWWLLNSIENICHDDLLPAGSPWTCPGDRVFFDASVIWGLVGPRRIFGSQGNYSTMNWFFLGGALGPIIVWLLHKAFPKQSWIPLINLPVLLGATAAMPPATALNYNAWIFVGTIFNFFIFRYRKRWWQRYNYVLSAALDTGVAFMTVLLYFSLSLENKSITWWGTDGEHCPLASCPTAKGIMVDGCPAN* 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00345 738 MobiDBLite consensus disorder prediction 1 20 - -
Rops11g00345 738 NCBIfam OPT family oligopeptide transporter 25 703 IPR004813 GO:0035673
Rops11g00345 738 NCBIfam small oligopeptide transporter, OPT family 20 706 IPR004648 GO:0055085
Rops11g00345 738 PANTHER ISP4 LIKE PROTEIN 15 736 IPR004648 GO:0055085
Rops11g00345 738 Pfam OPT oligopeptide transporter protein 42 701 IPR004813 GO:0035673
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00345 Rops-Chr11 4747454 4754647 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00345 13 738 Organic Solute Cotransporters AT5G64410 81.018 0.0 1257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00345 - - gmx:100811348 1348.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g00345 11 4747454 4754647 Rops11g00345 11 4747454 4754647 ECH
Rops11g00345 11 4747454 4754647 Rops2g01880 2 29536717 29541170 PCT