Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01379 ATGGCTCCCTCTAACTTCCCTCTTCGTTGGGAGAGCACAGGAGACAAATGGTGGTATGCATCTCCTATTGATTGGGCTGCTGCAAATGGCCTCTATGATTTGGTCACTGAGCTTCTTCACCTTGACACCAACCTCCTCATTAAGCTCACTTCCCTTCGTAGAATTCGCCGCCTTGAAACTGTGTGGGATGATGAGGCTCAATTTGAAGGTGTTGCCAAGTGTCGAGCAAAGGTTGCAAGGAATCTTATGCATGAGTGTGAGACAGGAAGAGGGTACAACTCTCTCATACATGCTGGCTATGGTGGATGGTTTTTGTACACTGCTGCCTCAGCTGGGGATGTGGATTTTGTTCAGGAATTGTTGGGAAGAGACCCTTTGTTAGTGTTTGGTGAAAGAGAGTATGGTGTGACTGACATGTTTTATGCTGCAGCTAGGAGCAAGAACTCTGAGGTGTTCAAGATCCTCCTTGATTCTGCCCTTTCAAGAAAAGAGTGCCTTGGTAGCATTGGAGCAGAATTGGAAGGGCAGTTAGATGAAGGTTCTTGGGATTTCAAGAGGGATATGGTGAATAGGGCTATTCATGCAGCTGCCAGAGGAGGGAATTGGGAAATACTGAAGCAGCTTTTAGGAAGTGTTTCTCAGATTTTGCCCTATAGAGATGCTCAAGGATGTACAGTCTTGCATGCTGCAGCTGCAAGAGGACAGGTTGAGGTGGTCAGAAATCTAATTGTATCATATGATATTATCAACTCAACTGATGCTCAAGGCAATACAGCATTACATGTGGCTTCTTACAAAGGTCACTTACCTGTGGTAGAGATTCTGATTCAAGAATCTCCCTCACTAACAATGTTAACCAATCACTATGGAGATACTTTTCTCCATATGGCAGTGGTTGGCTTCAGAAGCCCTGGTTTCGGCAGACTGGACAAGCACACTGAGCTCATGAAGCAATTGCTAAGTGATAAGATTGTGAACATGAGGGACATCATCAATGTCAGGAACAATGATGGAAGAACAGCTCTTCATGTTGCTGTTATTCATGATGTCCAATGTGATGTAGTGGAATTACTGATGTCTGCTCCATCAATTGATTTGAACATTCGTGATGCTAATGGAATGACCCCTCTGGATCATCTGAAGCAAAGATCAAGATCAGCATCATCTGAAATTTTAATCAAGCAGTTGATTTCAGCTGGAGGGATATCTAATTGTCAGGACTATATAGCAAGAAATGCACTTGTGAGTCATCTGAAAACTAATGGTATTGTAACCAGTCCTGGAACTTCATTTAGAATATCAGATGCTGAGATATTCTTGTACACAGGCATTGAGAATTCATCTGATGCTAATTATGATCAGGCAAGTGTAGAATCAAATTCATGCACAAGTGAAATAAACAATTATGAGTCAGTCAATTCCCCATATTACTGCAAGTCTAGTTCTGCCAATCAAGCTGCAAGGCCCTTAAAGAATCTTCTCCAATGGCCTAGGAGAAGAGAAACCAAAACAGCCACCTCAGAGTTGCAAGATGCTAATTCTGTGGATTCCTTCAATTCAAGAAAAAACTTGGAAGACTTTCCAATCCCATTAAGGCAAAGATACTCAAAACCATGCTCCCTTCCAAACAACAAAAGAACACTGTCTATAAGGACTTATGTTCCAAGTCCATCAGCAAAAAAATATTTTACAGAAGGCCTAATGCAAGGAGTAATCAAGGTAAAGCCACATGTGCCTCATCTTGCTCATTCAATTTCTAGTCCTTTTAAAGAATTGTCTATTTCTTCTCATTCTTCGGACAATAAGCAAAAACGTGTTGATATAATGGGACCCTCTTGCTCCAATAGACCAATACATGATGGTGGCACCCTACAGATGAACTATAAGGAGAGCTCCTTCAATAAGAAATTGATGAACCGATATTTTTCTTTTGGAGCACAAGGCCAAGCTTTGGAAGATGCAAATAGCTGCACAATATCAAATAGCAGTTATGAGCGTTTCAGTTCTTTAGTTGCATAA 2019 0.4156 MAPSNFPLRWESTGDKWWYASPIDWAAANGLYDLVTELLHLDTNLLIKLTSLRRIRRLETVWDDEAQFEGVAKCRAKVARNLMHECETGRGYNSLIHAGYGGWFLYTAASAGDVDFVQELLGRDPLLVFGEREYGVTDMFYAAARSKNSEVFKILLDSALSRKECLGSIGAELEGQLDEGSWDFKRDMVNRAIHAAARGGNWEILKQLLGSVSQILPYRDAQGCTVLHAAAARGQVEVVRNLIVSYDIINSTDAQGNTALHVASYKGHLPVVEILIQESPSLTMLTNHYGDTFLHMAVVGFRSPGFGRLDKHTELMKQLLSDKIVNMRDIINVRNNDGRTALHVAVIHDVQCDVVELLMSAPSIDLNIRDANGMTPLDHLKQRSRSASSEILIKQLISAGGISNCQDYIARNALVSHLKTNGIVTSPGTSFRISDAEIFLYTGIENSSDANYDQASVESNSCTSEINNYESVNSPYYCKSSSANQAARPLKNLLQWPRRRETKTATSELQDANSVDSFNSRKNLEDFPIPLRQRYSKPCSLPNNKRTLSIRTYVPSPSAKKYFTEGLMQGVIKVKPHVPHLAHSISSPFKELSISSHSSDNKQKRVDIMGPSCSNRPIHDGGTLQMNYKESSFNKKLMNRYFSFGAQGQALEDANSCTISNSSYERFSSLVA* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01379 672 ProSiteProfiles Ankyrin repeat region circular profile. 255 277 - -
Rops2g01379 672 ProSiteProfiles Ankyrin repeat profile. 255 287 IPR002110 GO:0005515
Rops2g01379 672 PANTHER ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATED 3 416 - -
Rops2g01379 672 SUPERFAMILY Ankyrin repeat 105 393 IPR036770 -
Rops2g01379 672 SMART ANK_2a 372 405 IPR002110 GO:0005515
Rops2g01379 672 SMART ANK_2a 255 284 IPR002110 GO:0005515
Rops2g01379 672 SMART ANK_2a 134 164 IPR002110 GO:0005515
Rops2g01379 672 SMART ANK_2a 222 251 IPR002110 GO:0005515
Rops2g01379 672 SMART ANK_2a 100 129 IPR002110 GO:0005515
Rops2g01379 672 SMART ANK_2a 188 218 IPR002110 GO:0005515
Rops2g01379 672 SMART ANK_2a 18 47 IPR002110 GO:0005515
Rops2g01379 672 SMART ANK_2a 337 368 IPR002110 GO:0005515
Rops2g01379 672 SMART ANK_2a 289 329 IPR002110 GO:0005515
Rops2g01379 672 ProSiteProfiles Ankyrin repeat region circular profile. 222 243 - -
Rops2g01379 672 Pfam Ankyrin repeats (3 copies) 289 370 IPR002110 GO:0005515
Rops2g01379 672 Pfam Ankyrin repeats (3 copies) 193 279 IPR002110 GO:0005515
Rops2g01379 672 ProSiteProfiles Ankyrin repeat profile. 222 254 IPR002110 GO:0005515
Rops2g01379 672 Gene3D - 11 420 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01379 Rops-Chr2 19707364 19710882 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01379 192 426 Miscellaneous Gene Families AT2G31820 27.698 1.14e-12 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01379 - - gmx:100791999 1079.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03748 11 71169163 71172134 Rops2g01379 2 19707364 19710882 PCT