Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03748 ATGCCTCCTTCATACTTTCCTCTTCGTTGGGAGAGCACAGGAGAACAATGGTGGTATGCATCTCCCATTGATTGGGCTGCTGCAAATGGCCTTTATGATCTTGTGGTGGAGCTACTCCACCTTGACCCCAATCTCCTTATTAAGCTCACTTCACTTTGTAGGATTCGTCGCCTTGAAACTGTGTGGGATGATGAGGCACAGTTTGAAGATGTAGCTAAATGTAGGTCACAGGTTGCAAGGAATCTCATGCATGAGTGTGAGACAGGAAGAGGACACAACTCTCTAATTAGAGCTGGCTATGGTGGATGGCTTCTCTACACTGCTGCTTCAGCTGGGGACGTGGATTTTGTTCAAGAATTGTTGGGAAGAGACCCTTTTCTTGTGTTTGGAGAAGGAGAGTATGGAATCACTGATATACTGTATGCTGCAGCTAGGAGCAAAAATTCTGAGGTCTTCAAGTTCCTCCTTGATTCTGCTTTGTTTCCAAGAGAATGCCAAAGTAGTGGAGCAGAATTGGAGGAGGTTTTTAAGAGGGATATGATGAATAGGGCCATTCATGCTGCTGCAAGAGGTGGGAACTGGGAGATACTGAAGCAGCTTGTTGGAAGTGATTCTGGCATTTTAGTCTATAGAGATACTCAAGGATGCACTGTCTTGCATACAGCAGCCGGCCGAGGCCAAGTTGAGGTGGTGAGAAATCTACTTGCATCATTTGATATTATCAACTTAACAGATGCTCAAGGGAACACGGCATTACATGTAGCTTCTTACAGGGGTTACTTACCTGTGGTAGAGATTCTGATTCTTGCATCTCCCTCACTAGCATTGTTAACCAATCACTATGGAGATACTTTTCTACATATGGCACTGGCTGGTTTCAAAAGTACTGGTTTCCGGAGACTGGACAAGCACACTGATCTCATGAAGCAATTGGTAAGTGAAAAGATTGTTAACATACAAGACATCATCAATGTTAAGAACAATGATGGAAAAACAGCACTTCATGTAGCCGTGATTGATAACATCCAATTTGAGCTAGTGGAATTATTGATATCTGTGCCATCAATTGATTTGAACATCAGTGATGCTGATGGAATGACCCCTTTGGATCTTTTGAAGCAAAGACCACAATCAGCATCTTCTGATATCTTAATCAAGCGGTTGATATCTGCTGGAGGGATCTCTAATCATCAGGATGCTATGACAAGAAATACCCTTTTCACTCATCTGAAAACCAATGTCATTGGAGGAAGTCCTGGCACTTCATTTAGAATACCAGATGCAGAGATATTCTTGTACACTGGCATTGAGAATGCATCTGATGCCAATGATGATCAAGCAAGTGTGGAATCATATTCATACTCTAGTGAACTAAACAATTCTGACTCAGCCAATTCCCCATATAGAAGCAAGTCTAATTCTGTCAATTATGCTGCAAGACGCTTAAAGTTTCTTCTCAGGTGGTCTAAGAGAAGAGAGACAAAAACAGCTACCTCAGAATTGGAAGATGATGATTCTCTTGATCCTTTCAGTTCAAGTAGAAACTTGCAAGAGTTTCCAATCCCATTACGGCAAAGATACTCACAACCATGCTCCCTTCCAAACAACAAAAGAACACAATCTAAAAGGAGTTTTCTTCCAAGTCCATCCTCCAAAATGAATTTCACTGCAGGCCTAATGCAAGGCGTTATTCAACTAAAGCGACAAGTTTCTAGTCCTTTTCAAGAATTATCAGTGGCTTCTCTTTCTTTGGTCAATAAACAAAAGGGTGTTGATGATATGATGGGACCCTCTTGCTCCAATAGATCAATAGATGATGGCACACTTCAATTGAACTACAAACAAGGTTCCTTCAATAAGAAATTGATGAATCGGTATTTTTCTTTTGGAACAAAAGGCCTGGCCGTGGAAGATTCAAATAGCTGTGCAAAGTCAAATGGGAGCTATAAGCATTTCAGCTCTGTGGTTGCTTAA 1974 0.4154 MPPSYFPLRWESTGEQWWYASPIDWAAANGLYDLVVELLHLDPNLLIKLTSLCRIRRLETVWDDEAQFEDVAKCRSQVARNLMHECETGRGHNSLIRAGYGGWLLYTAASAGDVDFVQELLGRDPFLVFGEGEYGITDILYAAARSKNSEVFKFLLDSALFPRECQSSGAELEEVFKRDMMNRAIHAAARGGNWEILKQLVGSDSGILVYRDTQGCTVLHTAAGRGQVEVVRNLLASFDIINLTDAQGNTALHVASYRGYLPVVEILILASPSLALLTNHYGDTFLHMALAGFKSTGFRRLDKHTDLMKQLVSEKIVNIQDIINVKNNDGKTALHVAVIDNIQFELVELLISVPSIDLNISDADGMTPLDLLKQRPQSASSDILIKRLISAGGISNHQDAMTRNTLFTHLKTNVIGGSPGTSFRIPDAEIFLYTGIENASDANDDQASVESYSYSSELNNSDSANSPYRSKSNSVNYAARRLKFLLRWSKRRETKTATSELEDDDSLDPFSSSRNLQEFPIPLRQRYSQPCSLPNNKRTQSKRSFLPSPSSKMNFTAGLMQGVIQLKRQVSSPFQELSVASLSLVNKQKGVDDMMGPSCSNRSIDDGTLQLNYKQGSFNKKLMNRYFSFGTKGLAVEDSNSCAKSNGSYKHFSSVVA* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03748 657 SMART ANK_2a 364 397 IPR002110 GO:0005515
Rops11g03748 657 SMART ANK_2a 100 129 IPR002110 GO:0005515
Rops11g03748 657 SMART ANK_2a 18 47 IPR002110 GO:0005515
Rops11g03748 657 SMART ANK_2a 281 321 IPR002110 GO:0005515
Rops11g03748 657 SMART ANK_2a 329 360 IPR002110 GO:0005515
Rops11g03748 657 SMART ANK_2a 180 209 IPR002110 GO:0005515
Rops11g03748 657 SMART ANK_2a 247 276 IPR002110 GO:0005515
Rops11g03748 657 SMART ANK_2a 214 243 IPR002110 GO:0005515
Rops11g03748 657 SMART ANK_2a 134 164 IPR002110 GO:0005515
Rops11g03748 657 ProSiteProfiles Ankyrin repeat region circular profile. 247 268 - -
Rops11g03748 657 Gene3D - 12 410 IPR036770 -
Rops11g03748 657 ProSiteProfiles Ankyrin repeat profile. 247 279 IPR002110 GO:0005515
Rops11g03748 657 ProSiteProfiles Ankyrin repeat profile. 214 246 IPR002110 GO:0005515
Rops11g03748 657 MobiDBLite consensus disorder prediction 495 548 - -
Rops11g03748 657 Pfam Ankyrin repeats (3 copies) 185 268 IPR002110 GO:0005515
Rops11g03748 657 MobiDBLite consensus disorder prediction 528 548 - -
Rops11g03748 657 SUPERFAMILY Ankyrin repeat 104 385 IPR036770 -
Rops11g03748 657 Pfam Ankyrin repeat 329 362 IPR002110 GO:0005515
Rops11g03748 657 MobiDBLite consensus disorder prediction 447 472 - -
Rops11g03748 657 ProSiteProfiles Ankyrin repeat region circular profile. 214 235 - -
Rops11g03748 657 PANTHER ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATED 4 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03748 Rops-Chr11 71169163 71172134 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03748 186 371 Miscellaneous Gene Families AT2G31820 33.511 2.70e-20 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03748 - - gmx:100796359 991.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03748 11 71169163 71172134 Rops11g03748 11 71169163 71172134 ECH
Rops11g03748 11 71169163 71172134 Rops2g01379 2 19707364 19710882 PCT