Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01353 ATGGCAACCAAGGAGAAAGAAGTGGAGAAAAAGAATCATCAAGAACTGAAGCATCTTGCGTTTGTGAAGATTGCTGCAATTCAAGCTTTTGTGTGTGTGTCGAATCTTTACGAGTATGCGAAGCAGTACTCAGGACCTTTGAGATCTGCTGTTGGAACCGTGGAAGGAACTGTAACAACCGTTTTGGGTCCTGTCTACGACAAAATCAAGGGTGTCCCTTACGATCTCCTTGTTTTTGTGGACAACAAGGTGGATGAAGCTGCTCACAAATTCGATGAGCATGCTCCTCCTTTGGTTAAGAAGGTAGCAAGGCAAGCCAAGGGTTTGATTCAGGAAGTGACACACAAAGCAGAGAAAGTTGTAAGTGAGGCTCAATCTGGAGGGGCACGAGCTGCTTCATATTATGTTGCTACAGAGTCTAAGCAAATTGTGCTTATTGGCTCAGTGAAATTGTGGGCTGGTCTCAACCACTATCCACCATTCCATGCAGTGGCAGATATGGCAGTTCCCACGGCTACATATTGGTCCGAAAGGTATAACCACGTGGTCAAGGACATGACCGGAAAAGGCTGTGCTGTTTTCGGGTATTTGCCTTTGATTCCCATTGACAACATAGCTAAGGCATTTAAACAAGGGGAAGCCAATGTTAATGGAGATGAAGCAGGTTCCGTGGGACAGAAATCAGAATCTAATGATTCTGATTGA 705 0.4496 MATKEKEVEKKNHQELKHLAFVKIAAIQAFVCVSNLYEYAKQYSGPLRSAVGTVEGTVTTVLGPVYDKIKGVPYDLLVFVDNKVDEAAHKFDEHAPPLVKKVARQAKGLIQEVTHKAEKVVSEAQSGGARAASYYVATESKQIVLIGSVKLWAGLNHYPPFHAVADMAVPTATYWSERYNHVVKDMTGKGCAVFGYLPLIPIDNIAKAFKQGEANVNGDEAGSVGQKSESNDSD* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01353 234 PANTHER REF/SRPP-LIKE PROTEIN OS05G0151300/LOC_OS05G05940 1 230 IPR008802 -
Rops2g01353 234 Pfam Rubber elongation factor protein (REF) 11 211 IPR008802 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01353 Rops-Chr2 19333553 19335186 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01353 - - gmx:100499806 332.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g01353 2 19333553 19335186 Rops2g01353 2 19333553 19335186 ECH
Rops11g03712 11 70773717 70777096 Rops2g01353 2 19333553 19335186 PCT