Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03712 ATGGCCACCAACGAGATAGAGGTCAAGGCTGAGAGCAAAAACAAAGAACTAAAGCATCTGGGGTTTGTGAGGGTTGCTACTATTAAAACTTACGTGTTCGTGGCAAATCTATATGAGTGCGCAAAGAAGAACGCGGGGCCTTTGAGACCAGCTGTTGGAACGGCGGAGGGCACTGTAACCACCGTTCTTGGTCCTGTCTACAACAAATTGAAGGGCATCCCCGATGATGTCCTGGTTTATGTTGACAACAAGGTGGATGAAGCTACTCACAAGTTCGATGAGCATGCCCCTCCTTTTGCTAAGCAGCTTGTGGACCAAGCCAAGGGTTTGATTCTGAAAGTAAAACATGAAGCGGGGAAAGTTGCAAGTGAGGCTCAATCTGGAGGGCCACGAGCAGCTGTAGATCATGTTGCTACAGAGTCAAAGCATATTCTGCTAACAAATTCAGTGAAGTTGTGGACTGGGCTCAACCACTTTCCACCTTTCCATGCAGTAGCAGAGATGACAGTTCCCACTGCTGCTCACTGGTTGGAGAAGTACAACCATGTAATCAAGGTCATGACTGAAAAGGGTTATAGTGTCGTTGGGTATTTACCTTTGATTCCCGTTGACGACATAGCTAAGGAATTTAAGCGGGAAGAAGCGAAATTGAAAGGAGATGAAGCAACCTGTGCGGAACAGAAATCAGAGTAG 693 0.4675 MATNEIEVKAESKNKELKHLGFVRVATIKTYVFVANLYECAKKNAGPLRPAVGTAEGTVTTVLGPVYNKLKGIPDDVLVYVDNKVDEATHKFDEHAPPFAKQLVDQAKGLILKVKHEAGKVASEAQSGGPRAAVDHVATESKHILLTNSVKLWTGLNHFPPFHAVAEMTVPTAAHWLEKYNHVIKVMTEKGYSVVGYLPLIPVDDIAKEFKREEAKLKGDEATCAEQKSE* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03712 230 PANTHER REF/SRPP-LIKE PROTEIN OS05G0151300/LOC_OS05G05940 1 223 IPR008802 -
Rops11g03712 230 Pfam Rubber elongation factor protein (REF) 12 211 IPR008802 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03712 Rops-Chr11 70773717 70777096 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03712 - - gmx:100816931 347.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03712 11 70773717 70777096 Rops2g01353 2 19333553 19335186 PCT