Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01157 ATGGACCCATCATTGCCAGGCCCAAACAACCAAGACGACGACGTTTTCTTCGATGCTCTTCCCCACTGTCCCTTTCACCATTGCTCCGGCAACGCCGATGACTCGCTGGAATCTTCCGCCTCTGCTTCCAACCCTGACTCACCCTCCCCATCTCCGGCCACCACAATCCGGCGCCGTTCAAATCGCCGTCGGTCACCGGTCAGGGAATCGCCGGACACCGATTCCGACATCAATTCGACCAACGGTGCCACAACTAGCTTTGAAAGAAATCAAAATCATGCAATTTCGAAGGAAAATGAGAATTTTCCCGAGAAATGCGATTCAAATCAAGAGAAAGTTCGTTCCTTTCCATCTCCGAGTGTCGTTACCGAAGAGAGAAACGAAGAATCGACCTTAACCACAGCTGAAAACGACGACGTACTCAGAAATTCCACGGAAATCGGTGATTCTCCTTTGAATTCGCTTGAATACGTAGTGGGGTTGGTGATTAAGGCAATTGTGTTGCAAATCAAGGTTTTCATTTTATTGATAAATTGCCCCATGTTGTTTTTGTTTCACACTTACATGCTTTTTACGGACCCTTTTGGAACAATTAGAAAAGGGAAGGTTTTTTTTATGGGGATGTTGGATAAAGTGTGGTTTTGTGTTTGTGGGTACATTGGTCCTTCAGCTCAAGGATGGTTCAATGAGCATAAGTCATTGTGGAATGTTGCATTTAGGTGTGGTTGGGGCTTCTTGGGGTCAATCTCTGTCTGCTTCATTTTGTTTGCTCTTTCAGTTTCCTCACTTTTGGTTAGTTGGTTTTTGGTGAAGTGTTTGGTGGAGAAGCCATTTCAGATGAAGCAAGTTTTGAATTTTGACTATACCAAACAGAGTCCTGTTGCATTTGTGCCCATAATGTCATGTGCTGGTGTTGGTGGTGGTGTGCAAGATTCTGAGATTGAGTTTGCAGTTAGCAGGTGGATGAGTAGAAGGGTTATACCTGCTAATCAAAGGGTGCATGTAACTGTTTCATTGCTAGTTCCAGAGTCAGAATACAACTCAAATCTTGGAGTCTTTCAGATCAGGGTAGACTTCTTATCTTCTAATGGTAAAACAAGTGCAAGTTCGAGCAAACCTTGCATGTTAAAATTCAGAAGTGAGCCTATCCGCCTAATCATGACTTTCCTCAAGATTGCTCCTCTTGTTACTGGTTATACATCAGAAACCCAGACTCTGAATGTCAAGATGAGAGGTCTTTTTGAAGGGGATGTACCTACTTCATGCCTAAAAGTAACCCTTGAGCAGAGAGCAGAATATCAACCTGGTACTGGCATTCCTCAAATATATGATTCATCTATAGTTATTGAATCAGAACTTCCCTTATTCAAGAGGATTATGTGGCATGGGAAGATAATCATATTTATATGGATCACAATGACAGCATTCATGATGGAGTTACTCTTTGTTCTAGTGTGTTGTTGGCCTATAATTATTCCAAGAACCAGGCAAAGGAGTAGTTCTGCTCGCGGTACTGGTACCCAAAACAATCTTCAGACACCAAGTTGA 1548 0.4302 MDPSLPGPNNQDDDVFFDALPHCPFHHCSGNADDSLESSASASNPDSPSPSPATTIRRRSNRRRSPVRESPDTDSDINSTNGATTSFERNQNHAISKENENFPEKCDSNQEKVRSFPSPSVVTEERNEESTLTTAENDDVLRNSTEIGDSPLNSLEYVVGLVIKAIVLQIKVFILLINCPMLFLFHTYMLFTDPFGTIRKGKVFFMGMLDKVWFCVCGYIGPSAQGWFNEHKSLWNVAFRCGWGFLGSISVCFILFALSVSSLLVSWFLVKCLVEKPFQMKQVLNFDYTKQSPVAFVPIMSCAGVGGGVQDSEIEFAVSRWMSRRVIPANQRVHVTVSLLVPESEYNSNLGVFQIRVDFLSSNGKTSASSSKPCMLKFRSEPIRLIMTFLKIAPLVTGYTSETQTLNVKMRGLFEGDVPTSCLKVTLEQRAEYQPGTGIPQIYDSSIVIESELPLFKRIMWHGKIIIFIWITMTAFMMELLFVLVCCWPIIIPRTRQRSSSARGTGTQNNLQTPS* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01157 515 PANTHER BERNARDINELLI-SEIP CONGENITAL LIPODYSTROPHY 2 HOMOLOG BSCL2 PROTEIN 144 512 IPR009617 GO:0019915
Rops2g01157 515 MobiDBLite consensus disorder prediction 32 56 - -
Rops2g01157 515 MobiDBLite consensus disorder prediction 112 128 - -
Rops2g01157 515 MobiDBLite consensus disorder prediction 93 111 - -
Rops2g01157 515 Pfam Putative adipose-regulatory protein (Seipin) 257 475 IPR009617 GO:0019915
Rops2g01157 515 MobiDBLite consensus disorder prediction 72 92 - -
Rops2g01157 515 MobiDBLite consensus disorder prediction 24 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01157 Rops-Chr2 16527626 16530203 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01157 K19365 - gmx:100813988 701.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g01157 2 16527626 16530203 Rops2g01157 2 16527626 16530203 ECH
Rops11g00777 11 11104200 11106287 Rops2g01157 2 16527626 16530203 ECH
Rops2g01157 2 16527626 16530203 Rops11g00777 11 11104200 11106287 PCT