Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00777 ATGGACCCGCCAGCTTCAATCCACGAACATGAAAACGACGACGTTTTCATCGACGCTCTTCACTGCCCCGCCGACGACACGCCGGAATCTTCTGCCTCCGATTCCACGCTTTCGGATCCTCCACCCGTTTCACCCGAACCTCATCCCAACCCGACCTCTCCGGTGACCACACTCCGGCGCCGGCCAATTAGTCGCGAATTTCCGGTTAAGAAATCGTCGGATTTAGGTACCGATAACGATTCGTTCAATGACGGGAGAAGATGCTTCTGGAATCAGGCAAAGTATATAAATCTCAAGGAAGATGAGAATTTTGCTGCGAAATCCGATTCGGATGACTCGCTACAAGTTCGTGCTTCGCCGGAAGAGAACAACGAGGAATCGACGGTAACTACAGCTGTGAATGATGATACAGCTGGAGATTCTGCCGAGTCGGCACAGCGACTCGGTGACTCGTCTTCGAATTTTCTAGAATTCATTGCGGATTTGGTGATTAAGGCATTAGGGTTTCAGATTAAGTTAATCTTCTTGTTCGTGACTTTTCCGTTGCTGTTCCCGTTTCGTTGTTGCATGTTTTTCATCGATCCTTTTGGGACAATAAGAAAGGGCAAGGCTTATTTGATTGGAATTTTGTGCAGAGCTTGGGGTGTTGTGTTTGGGTGCATTAAACCATATATTGGGAAATGGTTTAAGGAGAATGATTCAATTTGGAGCGTGGCATTTCGTTTTGGATGGGGTGTCTTATGGTCAATTTATGTTTGTTGCGTTTTGTTTGGTATTCTGGTTTCTTCGTTTGTGTTTGGTGGGTTTTTTATGAAGTGCTTCGTGGAGAAGCCAATTCAGATGAGGCAAGTTTTGAACTTTGATTACACCAAACATAGTCCTGTGGCATATGTGCCTATAATATCATGTGATGGTGTTATTGGTGGGAAAGATTCTGACAATAATGTTCAAGTTAGGAAGTGGGTGGGTGAACGGGTTATACCTTCTGAACACAAAGTGCAAGTCACTGTTTCATTGACAGTGCCAGAGTCAGGATACAACAGAAATCTTGGGGTCTTTCAGGCCAGGGTAGATTTTCTATTGTCTAATGGTAAAACTATGGCAAGCTTAAGTCAACCTTGCATGTTAAGATTCAGAAGTGAGCCTATCCGTCTAATCACGACTTTCCTCAAGATTGCTCCTCTTGTTACTGGCTATATATCAGAAACCCAGACTCTGAGTGTCAAGATGAGAGGTTTTGTTGAAGGGGATATACCAACTTCGTGCTTGAAAGTGACACTTGAGCAACGAGCTGAATATCAACCTGGTGCTGGCATTCCTGAAATATATGATGCATCTCTGGTTATTGAGTCCCAACTTCCGTTTTTCAAGAGGATCATTTGGCATTGGAAGATGAGCGTATTTATATGGATCACGATGATGGCATTCTTCACGGAGTTAATTTTTGTTCTACTGTGTTGTAGGCCTATATTAATTCCGAGAACAAGGCAAAGGGTGGCTTCTTCTCGTGGTCCTGCAACCTAA 1524 0.4416 MDPPASIHEHENDDVFIDALHCPADDTPESSASDSTLSDPPPVSPEPHPNPTSPVTTLRRRPISREFPVKKSSDLGTDNDSFNDGRRCFWNQAKYINLKEDENFAAKSDSDDSLQVRASPEENNEESTVTTAVNDDTAGDSAESAQRLGDSSSNFLEFIADLVIKALGFQIKLIFLFVTFPLLFPFRCCMFFIDPFGTIRKGKAYLIGILCRAWGVVFGCIKPYIGKWFKENDSIWSVAFRFGWGVLWSIYVCCVLFGILVSSFVFGGFFMKCFVEKPIQMRQVLNFDYTKHSPVAYVPIISCDGVIGGKDSDNNVQVRKWVGERVIPSEHKVQVTVSLTVPESGYNRNLGVFQARVDFLLSNGKTMASLSQPCMLRFRSEPIRLITTFLKIAPLVTGYISETQTLSVKMRGFVEGDIPTSCLKVTLEQRAEYQPGAGIPEIYDASLVIESQLPFFKRIIWHWKMSVFIWITMMAFFTELIFVLLCCRPILIPRTRQRVASSRGPAT* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00777 507 MobiDBLite consensus disorder prediction 106 146 - -
Rops11g00777 507 PANTHER BERNARDINELLI-SEIP CONGENITAL LIPODYSTROPHY 2 HOMOLOG BSCL2 PROTEIN 150 504 IPR009617 GO:0019915
Rops11g00777 507 Pfam Putative adipose-regulatory protein (Seipin) 259 475 IPR009617 GO:0019915
Rops11g00777 507 MobiDBLite consensus disorder prediction 120 146 - -
Rops11g00777 507 MobiDBLite consensus disorder prediction 20 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00777 Rops-Chr11 11104200 11106287 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00777 K19365 - gmx:100796452 700.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g00777 11 11104200 11106287 Rops11g00777 11 11104200 11106287 ECH
Rops11g00777 11 11104200 11106287 Rops2g01157 2 16527626 16530203 ECH
Rops2g01157 2 16527626 16530203 Rops11g00777 11 11104200 11106287 PCT