Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00995 ATGGCAGCAACCACAGTAGCAATGGCCATGATCAACGCAAAGTGCTTGAACACTGCTTCACCAAAGTTCCCCAACCCCACCAAACTCATCACTTCAAAACCAACCTCCCTCCTTTCCCTTCAGAACCTCCCAAAAGGCATGACCTCTACCAAAGCAACTGAAAACACCAAACTTTCCACTTCCCTGGCAGGCACCACAATTGCAGGAGCCATTTTCTCAACCCTTGGAAGCTGTGATGCTGCTTTTGCTGCTCAACAAATAGCTGAAATAGCAGAAGGTGATAACCGTGGCCTAGCACTGTTGTTACCCATAATTCCAGCCATAGCTTGGGTTCTGTTCAACATTCTGCAGCCAGCACTTAACCAAATCAACCGCATGCGTAGCACCAAAGGGGTAATCATTGGGTTGGGTCTTGGAGGGTTAGCAGCTTCAGGGTTGATGTCAGCACCAGATGCATCAGCTAGTGAGATTGCTGTGATTGCTGAAGCTGCTAGTGACAACAGGGGACAGCTTCTTCTCTTTGTGGTTACTCCAGCTATTCTTTGGGTCCTCTATAACATTTTGCAGCCTGCTCTCAACCAGATCAACAGGATGAGATCCCAGTGA 606 0.4818 MAATTVAMAMINAKCLNTASPKFPNPTKLITSKPTSLLSLQNLPKGMTSTKATENTKLSTSLAGTTIAGAIFSTLGSCDAAFAAQQIAEIAEGDNRGLALLLPIIPAIAWVLFNILQPALNQINRMRSTKGVIIGLGLGGLAASGLMSAPDASASEIAVIAEAASDNRGQLLLFVVTPAILWVLYNILQPALNQINRMRSQ* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00995 201 Hamap Photosystem II protein Y [psbY]. 94 128 IPR009388 GO:0009523|GO:0015979|GO:0016020|GO:0030145
Rops2g00995 201 PANTHER PHOTOSYSTEM II CORE COMPLEX PROTEINS PSBY, CHLOROPLASTIC 1 200 IPR038760 GO:0009523
Rops2g00995 201 Pfam Photosystem II protein Y (PsbY) 166 198 IPR009388 GO:0009523|GO:0015979|GO:0016020|GO:0030145
Rops2g00995 201 Pfam Photosystem II protein Y (PsbY) 94 126 IPR009388 GO:0009523|GO:0015979|GO:0016020|GO:0030145
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00995 Rops-Chr2 13990191 13991040 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00995 K02723 - zju:107428525 276.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00995 2 13990191 13991040 Rops11g03773 11 71415050 71415818 PCT