Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00719 ATGCAAGAGACACTCCTCACACTCTCTCTCTCCAACGAAGACATCATCATTCACCCCAACCTCCAAACAGCAAAGAAGAAAAAATCCCAACAACACAAACATGAAGTAGAAACCGATCACCCCGTTGTCCCAACTCCGTGTCTGAAATCACCTAAGACCAGAACACAACCCGGGTCACGCCGCGTCAGTCCCGCCGTAACGGAGAAGATCCTCCCTAACGGTGACGTATACATCGGAACCCTGTCGGGAAACAAGCCTCACGGCACTGGAAAATATCTCTGGTCAGATGGGTGCATGTACGAAGGGGAATGGAGGAAAGGGAAAGCAAGTGGAAAAGGAAGGTTCTCGTGGCCTTCTGGAGCTACCTATGTGGGTGAGTTCAAGTCGGGTCGGATAGAAGGATTCGGGTCATTCATCGGAGTCGACGGTGACATGTACCGGGGGATGTGGCTCGCTGACCGGAAGCATGGGTTTGGTGAGAAATGGTATGCTAATGGTGACATGTATGAGGGATGGTGGAGGTGCAACTTGCAGGATGGTGAAGGAAGGTATGTGTGGAAGAATGGGAATGTGTATGTTGGTGATTGGAGGTGTGGTGCTATTTCAGGGAATGGGGTTTTGGTTTGGCCAAATGGGAACCGTTATGAAGGGTATTGGGAAAATGGGGTGCCCATAGGGAAAGGAGTGTTCACTTGGAATTCTAAGAAGGAGGAGGTGAAGCTGTGTGAGTATCAGATGAAGAAGTCTTCGGTGGATAGTTTTAAGAGTGTGAGTTTTCCCAGGATTTGTATCTGGGAACTTGATGGAGAAGCTGGGGATATTACATGTGATATCCTTGACAATGTGCAGGCTTCTATGTTTTTTAAGCCTGGTAGTGAATCTGAAAATGGTGGTGAAGGTTATGGGGTTTTGCACAAGAGTCCTTGTTGGTCTCTTGATGGTGATGTTAAGAAGCCGGGTCAAACTGTGTCCAAGGGGCACAAGAATTATGACCTCATGCTTTGTGTTCAACTGGGTATCAGGTACACTGTTGCCAAGTATGCTTCCATTGTGAGAGAGCTTAGGCCAGGGGATTTTGATCCCAAAGAGAAGTTCTGGACAAGGTTTCCATCAGAAGGGTCCAAGTTTACACCTCCACATCAGTCAGTGGACTTTAGGTGGAAGGATTACTGTCCCATGGTGTTCAGATATCTAAGGGAATTATTTGCCATAGATCCTGCGGATTACATGCTTGCTATTTGTGGAAGTGACACACTTAGAGAGATGTCTTCTCCTGGCAAAAGTGGAAGCATCTTTTACCTCACTCAAGATGACAGGTTCATAATCAAGACTGTGAAGAAGTCTGAAGTCAAGGTGCTCATCAGGATGCTTCCAAGTTATCACCAACATGTTTGTCAGTACAAGAACTCCTTGGTAACAGCATTTCTGGGCGTTCATTGTGTCAAACCTATTGGAGGTCCAAAGATCCGGTTTGTTGTGATGGGCAATGTGTTTTGTTCGGAGTATCGGATCCATAAGAGGTTTGACCTCAAAGGTTCTTCTCATGGTCGAATAACGGATAAACCCCTGGAGGAGATTGATGAGACTACCACTCTCAAAGACCTCGATCTCAATTTTGTCTTTCGCCTGGAACAGTCCTGGTTTCAAGATCTTAAATGGCAACTTGATAGAGACTGCGAGTTCCTGGAAGCAGAGGGAATCATGGATTACAGTTTTCTGATTGGCATTCATTTTCGCAATGATTACTCAGTTGATGAAATGAAAAGTTCACCCCATGATTTGGATTCAGGCAAGAGAGACATACATGATGATGAGATGCAATTATGCAGGGGACCTCTAATTCGGCTGGGAATGAACATGCCTGCCAGAGCTGAGAGTGTGTGTAAGGCTATATTGGATCTGCAGACAGGTGGTGGAAGTGGCAATTCTACTCCTTCAAAGAGTGGTGGAGAGATCTCTGATGTAATCCTCTACTTTGGGATCATTGACATTCTCCAAGACTATGATATTACCAAAAAGATAGAACATGCATACAAGTCACTCCAAGTGGATCCCACCTCCATCTCAGCTGTTGATCCCAAGCTATACTCCAAAAGATTCAGGGATTTCATCCACAGAATCTTTGTGGAGGACAAATGA 2139 0.4577 MQETLLTLSLSNEDIIIHPNLQTAKKKKSQQHKHEVETDHPVVPTPCLKSPKTRTQPGSRRVSPAVTEKILPNGDVYIGTLSGNKPHGTGKYLWSDGCMYEGEWRKGKASGKGRFSWPSGATYVGEFKSGRIEGFGSFIGVDGDMYRGMWLADRKHGFGEKWYANGDMYEGWWRCNLQDGEGRYVWKNGNVYVGDWRCGAISGNGVLVWPNGNRYEGYWENGVPIGKGVFTWNSKKEEVKLCEYQMKKSSVDSFKSVSFPRICIWELDGEAGDITCDILDNVQASMFFKPGSESENGGEGYGVLHKSPCWSLDGDVKKPGQTVSKGHKNYDLMLCVQLGIRYTVAKYASIVRELRPGDFDPKEKFWTRFPSEGSKFTPPHQSVDFRWKDYCPMVFRYLRELFAIDPADYMLAICGSDTLREMSSPGKSGSIFYLTQDDRFIIKTVKKSEVKVLIRMLPSYHQHVCQYKNSLVTAFLGVHCVKPIGGPKIRFVVMGNVFCSEYRIHKRFDLKGSSHGRITDKPLEEIDETTTLKDLDLNFVFRLEQSWFQDLKWQLDRDCEFLEAEGIMDYSFLIGIHFRNDYSVDEMKSSPHDLDSGKRDIHDDEMQLCRGPLIRLGMNMPARAESVCKAILDLQTGGGSGNSTPSKSGGEISDVILYFGIIDILQDYDITKKIEHAYKSLQVDPTSISAVDPKLYSKRFRDFIHRIFVEDK* 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00719 712 Gene3D - 66 134 - -
Rops2g00719 712 Pfam MORN repeat 192 214 IPR003409 -
Rops2g00719 712 Pfam MORN repeat 215 234 IPR003409 -
Rops2g00719 712 Pfam MORN repeat 146 168 IPR003409 -
Rops2g00719 712 Pfam MORN repeat 123 145 IPR003409 -
Rops2g00719 712 Pfam MORN repeat 100 121 IPR003409 -
Rops2g00719 712 Pfam MORN repeat 77 99 IPR003409 -
Rops2g00719 712 Pfam MORN repeat 169 191 IPR003409 -
Rops2g00719 712 FunFam Phosphatidylinositol 4-phosphate 5-kinase 315 496 - -
Rops2g00719 712 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 86 709 IPR023610 -
Rops2g00719 712 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 71 190 - -
Rops2g00719 712 CDD PIPKc_AtPIP5K_like 329 707 - -
Rops2g00719 712 SMART morn 98 119 IPR003409 -
Rops2g00719 712 SMART morn 75 96 IPR003409 -
Rops2g00719 712 SMART morn 167 188 IPR003409 -
Rops2g00719 712 SMART morn 144 165 IPR003409 -
Rops2g00719 712 SMART morn 213 234 IPR003409 -
Rops2g00719 712 SMART morn 190 211 IPR003409 -
Rops2g00719 712 SMART morn 121 142 IPR003409 -
Rops2g00719 712 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 324 708 IPR002498 GO:0016307|GO:0046488
Rops2g00719 712 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 414 707 IPR002498 GO:0016307|GO:0046488
Rops2g00719 712 PIRSF PIP5K_plant 234 712 IPR017163 GO:0005524|GO:0016308
Rops2g00719 712 PIRSF PIP5K_plant 14 251 IPR017163 GO:0005524|GO:0016308
Rops2g00719 712 SMART PIPK_2 355 709 IPR002498 GO:0016307|GO:0046488
Rops2g00719 712 Gene3D - 145 256 - -
Rops2g00719 712 MobiDBLite consensus disorder prediction 23 63 - -
Rops2g00719 712 SUPERFAMILY SAICAR synthase-like 325 708 - -
Rops2g00719 712 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 315 496 IPR027484 -
Rops2g00719 712 Gene3D - 497 708 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00719 Rops-Chr2 10148693 10153087 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00719 45 711 Acyl Lipid Metabolism Gene Families AT1G21980 64.937 0.0 925
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00719 K00889 - gmx:100789188 1144.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00719 2 10148693 10153087 Rops10g00925 10 20398833 20399900 PCT