Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00925 ATGCAAGAGACACTGCTCACTCTCTCAGAGCAACACCAACAACAGCAACAAGAACAAGTTCAACTAAAGAAAAAGAAATCAGAAGAAGAGAAAGAGATAACAGAGAGGAACGACATAGAGCTAGTACTGGTGGTCCCACCACCGTGCCGGAAACCACCACACACGCGGCGCGTGTCACCTGAGGCTTCTGTGGAGAAGTCACTTCCCAACGGTGACTTGTACAGTGGAAGCTTGTCAGGGAAGGTGCCACACGGGACAGGGAAATACGTGTGGTCGGACGGTTGCATGTACGAGGGAGAATGGAAGAAAGGGAAAGCGTGGGGAAAAGGAAGGTTCTCGTGGCCTTCTGGAGCAACCTACGAGGGTGACTTTGTTTCTGGTCGGATGGAAGGTTCTGGAACCTTCGTGGGGGTTGAAGGTGACACATATAGAGGATCATGGGTTTCAGACAGGAAACATGGATATGGGGAGAAATGTTATGCTAATGGTGATGTGTATGAAGGATGGTGGAGGTGCAATCTTCAAGATGGTGAAGGGAGGTATGTTTGGAAGAATGGGAATGAGTATGTTGGGGAATGGAAGGGTGGTGCTATTTCAGGGAAAGGGGTGCTGACGTGGAAGAACGGGAACCGTTATGAAGGGTGTTGGGAGAATGGGGTACCTAAAGGGAAAGAGGTGTTCACAAATTTGGAGAAGGAGTTTGTGAATGAGGAGAGGTTTATGAAGAAGAGGGTGTCTTTTGATGGGTCAAAGAGTGTAAGTTTTCCAAGGATTTGTATTTGGGAACTTGATGGTGAAGCTGGGGATATCACTTGTGAGATTGTTGATAATGTGGAGGCGTCTATGTTTTACAAAGATGGTAGTGAATCAGAGAATGGTGGAGATTCTGGTTTTGGAATGTTTCAGAAAAGTCCTTGTTTTTCTCTTGATGGGGATGTTAAGAAACCTGGTCATACTGTCTCTAAAGGGCATAAGAATTATGATTTGATGCTTAATCTTCAATTGGGTATCAGATACTCTGTTGGGAAGCATGCTTCTATGGTGCGAGAGCTTAGGCCTGGAGATTTTGATCCAAAGGAGAAATTCTGGACGAGGTTCCCTCCTGAAGGGTCCAAGTTTACTCCTCCACATCAATCAGTGGACTTCAGGTGGAAAGACTACTGTCCAGTGGTGTTCAGACATCTAAGGGAATTATTTGCAATAGATCCTGCGGATTACATGCTTGCTATTTGCGGCAATGACACACTTAGAGAGATGTCTTCTCCTGGTAAAAGTGGTAGCTTCTTTTACCTCACTCAAGATGACCGATTTATTATCAAGACCTTGAAGAAGTCTGAAGTCAAGGTGCTCATCAGGATGCTACCAAGTTACTATCAACATGTTTTTCAGTACAAGAACTCCCTGGTAACAAAATTCCTGGGCGTTCATTGTGTCAAACCTATTGGTGGTCAGAAGACTCGGTTTATTGTAATGGGCAATGTGTTTTGCTCGGAGTATCGGATCCATAGGCGGTTTGACCTCAAAGGTTCTTCACATGGTCGAATGACTGATAAACCCCAGGAAGAGATTGATGAGACTACTACTCTTAAAGACCTTGATCTTAGTTTTGTCTTTCACCTGGAACAGTCGTGGTTTCAAGAGCTTAAATGGCAACTTGATAGAGACTGTGAATTCCTGGAAGCAGAGGGAATAATGGATTACAGTTTTCTGATTGGACTTCATTTTCGTGATGATTACTCACTTGATGAAATTAATAGTTCACCGGATGAGTTGTGTTCAGGCAAGAGAGAGATGCAGGATATGAAGTGGATACCCATAGGCCGGGGACCTCTGATCCGGCTGGGAACAAATATGCCTGCCAGAGCTGAGAGAGTGTGTAAAGCTGGATTGGACCAGCACACAGGTACTGGAAGTAGCAACTCTACCCCTACAAAGAGTAGTGGTGAGATCTCTGATGTAATCCTCTACTTTGGTATCATTGACATTCTCCAAGATTATGATATTAGCAAAAAGTTAGAGCATGCATACAAATCACTCCAAGTGGATCCCACCTCCATCTCAGCCGTTGATCCCAAGCTATATGCCAAAAGGTTTAGGGATTTCATACACAGAATCTTTGTAGAGGACAAATGA 2133 0.4454 MQETLLTLSEQHQQQQQEQVQLKKKKSEEEKEITERNDIELVLVVPPPCRKPPHTRRVSPEASVEKSLPNGDLYSGSLSGKVPHGTGKYVWSDGCMYEGEWKKGKAWGKGRFSWPSGATYEGDFVSGRMEGSGTFVGVEGDTYRGSWVSDRKHGYGEKCYANGDVYEGWWRCNLQDGEGRYVWKNGNEYVGEWKGGAISGKGVLTWKNGNRYEGCWENGVPKGKEVFTNLEKEFVNEERFMKKRVSFDGSKSVSFPRICIWELDGEAGDITCEIVDNVEASMFYKDGSESENGGDSGFGMFQKSPCFSLDGDVKKPGHTVSKGHKNYDLMLNLQLGIRYSVGKHASMVRELRPGDFDPKEKFWTRFPPEGSKFTPPHQSVDFRWKDYCPVVFRHLRELFAIDPADYMLAICGNDTLREMSSPGKSGSFFYLTQDDRFIIKTLKKSEVKVLIRMLPSYYQHVFQYKNSLVTKFLGVHCVKPIGGQKTRFIVMGNVFCSEYRIHRRFDLKGSSHGRMTDKPQEEIDETTTLKDLDLSFVFHLEQSWFQELKWQLDRDCEFLEAEGIMDYSFLIGLHFRDDYSLDEINSSPDELCSGKREMQDMKWIPIGRGPLIRLGTNMPARAERVCKAGLDQHTGTGSSNSTPTKSSGEISDVILYFGIIDILQDYDISKKLEHAYKSLQVDPTSISAVDPKLYAKRFRDFIHRIFVEDK* 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00925 710 Gene3D - 104 151 - -
Rops10g00925 710 Gene3D - 64 103 - -
Rops10g00925 710 Gene3D - 168 251 - -
Rops10g00925 710 FunFam Phosphatidylinositol 4-phosphate 5-kinase 312 493 - -
Rops10g00925 710 PIRSF PIP5K_plant 229 710 IPR017163 GO:0005524|GO:0016308
Rops10g00925 710 PIRSF PIP5K_plant 6 237 IPR017163 GO:0005524|GO:0016308
Rops10g00925 710 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 323 706 IPR002498 GO:0016307|GO:0046488
Rops10g00925 710 SMART morn 141 162 IPR003409 -
Rops10g00925 710 SMART morn 187 208 IPR003409 -
Rops10g00925 710 SMART morn 118 139 IPR003409 -
Rops10g00925 710 SMART morn 210 231 IPR003409 -
Rops10g00925 710 SMART morn 164 185 IPR003409 -
Rops10g00925 710 SMART morn 95 116 IPR003409 -
Rops10g00925 710 SMART morn 72 93 IPR003409 -
Rops10g00925 710 SUPERFAMILY SAICAR synthase-like 322 706 - -
Rops10g00925 710 FunFam Phosphatidylinositol 4-phosphate 5-kinase 104 148 - -
Rops10g00925 710 CDD PIPKc_AtPIP5K_like 326 705 - -
Rops10g00925 710 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 82 707 IPR023610 -
Rops10g00925 710 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 69 179 - -
Rops10g00925 710 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 411 705 IPR002498 GO:0016307|GO:0046488
Rops10g00925 710 MobiDBLite consensus disorder prediction 19 38 - -
Rops10g00925 710 Pfam MORN repeat 166 187 IPR003409 -
Rops10g00925 710 Pfam MORN repeat 189 211 IPR003409 -
Rops10g00925 710 Pfam MORN repeat 74 96 IPR003409 -
Rops10g00925 710 Pfam MORN repeat 212 224 IPR003409 -
Rops10g00925 710 Pfam MORN repeat 97 118 IPR003409 -
Rops10g00925 710 Pfam MORN repeat 143 165 IPR003409 -
Rops10g00925 710 Pfam MORN repeat 120 142 IPR003409 -
Rops10g00925 710 MobiDBLite consensus disorder prediction 1 70 - -
Rops10g00925 710 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 312 493 IPR027484 -
Rops10g00925 710 Coils Coil 5 37 - -
Rops10g00925 710 MobiDBLite consensus disorder prediction 1 18 - -
Rops10g00925 710 SMART PIPK_2 352 707 IPR002498 GO:0016307|GO:0046488
Rops10g00925 710 Gene3D - 494 706 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00925 Rops-Chr10 20398833 20399900 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00925 18 709 Acyl Lipid Metabolism Gene Families AT1G77740 65.811 0.0 955
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00925 K00889 - gmx:100808235 1189.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g00925 10 20398833 20399900 Rops10g00925 10 20398833 20399900 ECH
Rops2g00719 2 10148693 10153087 Rops10g00925 10 20398833 20399900 PCT