Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00714 ATGGCAGCTGAGCTCATCAATGCTGCAACAAGTGAGAAACTGGTTGAAATTGATTGGATGAAAAATATCAAAATCTGTGAATTAGTTGCTCATGATCAAAGGCAAGCTAAAGATGTTGTTAAAGTTATAAAAAAGAGACTGGGTAACAAGAACCCCAATGCTCAACTTTATGCTGTCATGTTGCTGGAAATGTTGATGAACAATATTGGAGATCATATTCACAAGCAGGTGATAGATACAGGAATTATCCCAATTCTTGTGAAAATTGTGAAGAAAAAGTCTGATTTGCCTGTGAGGGAGCGGATATTTCTCCTGCTAGATGCTATGCAAACATCCCTTGGTGGTGCTTCTGGAAAGTTTCCACAGTATTATGATGCATATTATGATTTGGTGAGTGCTGGGGTGCAGTTTCCTCAAAGAACTCAAGTTGTCCAATCAAATCGTCCTAGCTCACAACCCAATAGGACTAATAATGTACCAAACGGGGAGCAGGCCCCGCCTAGACATGGAGGGGTTGCTCAGCAAGCAGAGTCCAACACTGATGCTGGATCTAGCATCATTCAAAAGGCTAGTAATGCATTAGAAGTTCTAAAAGAAGTCCTTGATGCTGTTGATCCACAACATCCTCAGGGAGCAAGAGATGAATTCACTCTAGACCTTGTTGAACAATGTTCATTTCAGAAACAGAGGGTAATGCATCTTGTGATGGCTTCTAGAGATGAGAGGATAGTTTCCCGAGCAATTGAATTAAATGAGCAGCTTCAGAAAGTTCTTGCAAGACATGATGACCTTTCTAGCAGAGCTGCAACAACTGCTAATCACTTTGACCGTGAAGAAGCAGAGGAGGAAGAAGAACCTGAACAGTTATTCCGAAGATTACGCAAAGGAAAGGCTTGTGCGAGGCCTGAAGATGAAGAGACTGAACCTCAGTTCCCTAGCTTGTGTTTGCTTGAAGAGAGATTCAACTGTCCATTAATAAAACCACTCTCTTTGGAGCCATCTCGAGAAGCTAATGCTCATCCTGCACCTGCAGTAGTTCCTCATCCAAATGCAAAACACAATGGGGTGCTTCCTCATGTGGCAATTCCACCACCACCTGCAAAGCACATTGAGAGGGAGAGATATTTTCAGAAAAATAAGAAGGATGGTGCCACTTTGGCTAGCCACATGAGAGGCCTCTCCTTACACAGTCACAATGGCAGCAGCTCTCACAGTGGAAGCTTTGATTTTAGTGATTGA 1239 0.427 MAAELINAATSEKLVEIDWMKNIKICELVAHDQRQAKDVVKVIKKRLGNKNPNAQLYAVMLLEMLMNNIGDHIHKQVIDTGIIPILVKIVKKKSDLPVRERIFLLLDAMQTSLGGASGKFPQYYDAYYDLVSAGVQFPQRTQVVQSNRPSSQPNRTNNVPNGEQAPPRHGGVAQQAESNTDAGSSIIQKASNALEVLKEVLDAVDPQHPQGARDEFTLDLVEQCSFQKQRVMHLVMASRDERIVSRAIELNEQLQKVLARHDDLSSRAATTANHFDREEAEEEEEPEQLFRRLRKGKACARPEDEETEPQFPSLCLLEERFNCPLIKPLSLEPSREANAHPAPAVVPHPNAKHNGVLPHVAIPPPPAKHIERERYFQKNKKDGATLASHMRGLSLHSHNGSSSHSGSFDFSD* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00714 412 SUPERFAMILY GAT-like domain 144 265 - -
Rops2g00714 412 Pfam VHS domain 4 113 IPR002014 GO:0035091|GO:0043130
Rops2g00714 412 SUPERFAMILY ENTH/VHS domain 4 138 IPR008942 -
Rops2g00714 412 ProSiteProfiles VHS domain profile. 9 138 IPR002014 GO:0035091|GO:0043130
Rops2g00714 412 FunFam TOM1-like protein 2 1 147 - -
Rops2g00714 412 Coils Coil 247 267 - -
Rops2g00714 412 SMART VHS_2 2 134 IPR002014 GO:0035091|GO:0043130
Rops2g00714 412 MobiDBLite consensus disorder prediction 141 163 - -
Rops2g00714 412 Gene3D - 177 274 IPR038425 -
Rops2g00714 412 CDD VHS 2 130 - -
Rops2g00714 412 CDD GAT_GGA-like_plant 186 264 - -
Rops2g00714 412 MobiDBLite consensus disorder prediction 378 412 - -
Rops2g00714 412 Gene3D - 2 136 IPR008942 -
Rops2g00714 412 Pfam GAT domain 192 265 IPR004152 GO:0035091|GO:0043130
Rops2g00714 412 ProSiteProfiles GAT domain profile. 178 266 IPR004152 GO:0035091|GO:0043130
Rops2g00714 412 MobiDBLite consensus disorder prediction 141 183 - -
Rops2g00714 412 PANTHER TOM1-LIKE PROTEIN 1 308 IPR044836 GO:0035091|GO:0043130|GO:0043328
Rops2g00714 412 MobiDBLite consensus disorder prediction 392 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00714 Rops-Chr2 10072478 10078684 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00714 - - gmx:100802949 592.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00714 2 10072478 10078684 Rops2g00714 2 10072478 10078684 ECH
Rops2g00714 2 10072478 10078684 Rops10g00921 10 20355618 20361275 PCT