Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00921 ATGGCATCTGAGCTAGTCAATGCTGCAACAAGCGAGAAACTGGCTGAAACTGATTGGACAAAAAATATTGAGATCTGTGAGTTAGTTGCACAAGATAAAAGGCAAGCTAGAGATGTTGTTAAAGCTATCAAAAAGAGACTCGGGAACAAACACCCGAATACTCAACTTTATACTGTCATGTTGCTGGAAATGTTGATGAACAACATTGGAGAGAATATTCATGAGCAGGTGATTGATACTGGAATTATTCCTATTCTTGTGAAAATTGTGAAGAAAAAGTCTGATTTGCCTGTGAGGGAGCGAATATTTCTCTTACTAGATGCTACACAAACATCCCTTGGTGGTGCTTCTGGAAAGTTTCCACAGTATTATAATGCATATTATGATTTGGTGAATGCTGGAGTGCAGTTTCCTCAAAGGGCTCAAGTGGTCCAATCAAACCACACTGATTCACAACCTAGTCGGACTAGTACTGTACCAAGCAGGGAGCAGGCCTCACCTAGACATGAAGGGGTCGCTCGGCAAGCAGAGTCCCAGACTGTCCCTGAATCTAGCATTATTCAAAAGGCTACTAATGCATTAGAAGTCCTAAAAGAAGTCCTTGATAACATTGATGCTCAACATCCTGAGGGAGCAAGGGATGAATTCACCCTTGACCTTGTGGAACAATGTTCATTTCAGAAGCAAAGGGTAATGCATCTTGTGATGACTTCTCGAGATGAGAGGATGGTTTCTCGCGCAATTGAATTAAATGAGCAGCTGCAGAAAGTTCTTGCAAGACATGATGACCTTCTTTCTGGCAGAGCTACAAACACTGCTCCTCGTTTTGACCACAAAGAAGAGGAGGAGGAAGAGGAGCCTGAACAGTTAGTCCGAAGATTACGCAAAGGAAAGGCATGTGCAAGGCCCGAAGATGATGAGACTGAAACTGACGTCACTCGCTTTGGTTTGCTTGGAGAGAGACTCAATCGTCCTCTAATAAGACCACTCTCCTTAGAGCCATCTACTAGAGAAGCTGATATACGTTCTCCACCTGCTGTAATCCCACCACCTCCACGTCCAAAACAGAATGGAGAGCTTCCTCATGTGGCAATTCCACCACCACCTTCAAAGCACATTGAGAGGGAGAGATTTTTTCAGGAAAACAAGGATGGTTCTAATTTGTCTGGCCACATGAGAGGCCTTTCCTTACATAGTCGTAATGGCAGCAGTTCTCACAGTGGAAGCTTTGATTTTAGTGACTGA 1245 0.4361 MASELVNAATSEKLAETDWTKNIEICELVAQDKRQARDVVKAIKKRLGNKHPNTQLYTVMLLEMLMNNIGENIHEQVIDTGIIPILVKIVKKKSDLPVRERIFLLLDATQTSLGGASGKFPQYYNAYYDLVNAGVQFPQRAQVVQSNHTDSQPSRTSTVPSREQASPRHEGVARQAESQTVPESSIIQKATNALEVLKEVLDNIDAQHPEGARDEFTLDLVEQCSFQKQRVMHLVMTSRDERMVSRAIELNEQLQKVLARHDDLLSGRATNTAPRFDHKEEEEEEEPEQLVRRLRKGKACARPEDDETETDVTRFGLLGERLNRPLIRPLSLEPSTREADIRSPPAVIPPPPRPKQNGELPHVAIPPPPSKHIERERFFQENKDGSNLSGHMRGLSLHSRNGSSSHSGSFDFSD* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00921 414 SMART VHS_2 2 134 IPR002014 GO:0035091|GO:0043130
Rops10g00921 414 MobiDBLite consensus disorder prediction 142 183 - -
Rops10g00921 414 MobiDBLite consensus disorder prediction 344 368 - -
Rops10g00921 414 SUPERFAMILY GAT-like domain 151 268 - -
Rops10g00921 414 ProSiteProfiles VHS domain profile. 9 138 IPR002014 GO:0035091|GO:0043130
Rops10g00921 414 MobiDBLite consensus disorder prediction 273 311 - -
Rops10g00921 414 MobiDBLite consensus disorder prediction 383 414 - -
Rops10g00921 414 Pfam VHS domain 4 112 IPR002014 GO:0035091|GO:0043130
Rops10g00921 414 MobiDBLite consensus disorder prediction 142 164 - -
Rops10g00921 414 Gene3D - 1 136 IPR008942 -
Rops10g00921 414 Gene3D - 176 274 IPR038425 -
Rops10g00921 414 Coils Coil 187 207 - -
Rops10g00921 414 MobiDBLite consensus disorder prediction 268 311 - -
Rops10g00921 414 ProSiteProfiles GAT domain profile. 178 266 IPR004152 GO:0035091|GO:0043130
Rops10g00921 414 CDD VHS 2 130 - -
Rops10g00921 414 CDD GAT_GGA-like_plant 186 264 - -
Rops10g00921 414 MobiDBLite consensus disorder prediction 329 414 - -
Rops10g00921 414 FunFam TOM1-like protein 2 1 147 - -
Rops10g00921 414 SUPERFAMILY ENTH/VHS domain 4 140 IPR008942 -
Rops10g00921 414 PANTHER TOM1-LIKE PROTEIN 1 303 IPR044836 GO:0035091|GO:0043130|GO:0043328
Rops10g00921 414 Pfam GAT domain 193 267 IPR004152 GO:0035091|GO:0043130
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00921 Rops-Chr10 20355618 20361275 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00921 - - gmx:100785131 653.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g00921 10 20355618 20361275 Rops10g00921 10 20355618 20361275 ECH
Rops2g00714 2 10072478 10078684 Rops10g00921 10 20355618 20361275 PCT