Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00710 ATGGCTGAAGAGGCTCCAAAGCAAACAACAACAACAACACAAGAGTCAGTGGTGCAAGTGGTGGTGACTGATGTTCCAACAGAGAAAGATCCAGTTCCTGAGCCAGAGAAGAAGAAGCCTGTTGAGGAGACTGTGACTTTGGAGACTCACCTCTCCAAACCCAATACTGACAACAACAATGATGATGACAAAATTCCTGAATCTGGTTCATTCAAGGAAGAAAGCACCAAGCTTTCTGATCTTCCTGAGAATGAGAACAAGGCACTCCAAGAACTTAAGCAACTCATTCTAGAAGCACTCAACAAGCACGAGTTCTCTGCCCCACCACCATCTCCACTCAAAGAAGAAAAGCCAACAGCTGTAGCTGCTGAAAAAGAACAACCCCATGAGGAACAACAAAGTACTGAAGCTGAACCCACCAAAACTGAGGAGGAGGAGAAGGTTGCAATGAAGACAGAAGAAAAAGGAGGAGAGAAGAAGGAAGAAGTGAAAGAAACCGACGTGGCTGCTGCTGCTTCATCTGTGGATGATGATGGAGCAAAAACTGTGGAGGCCATTGAAGAGACAGTTGTTGCTGTCTCTTCTTCTGTTCCTGCAGAGCAACAAGCTGCTGAAGAGAAAGTGTCAGAAACTGAAGCCAAGGATGAAGCTGCTTCATTGCCATTGCCACCCGAAGAAGTATCCATTTGGGGGATACCACTCCTTGCAGATGAGAGAAGCGATGTGATTCTCTTGAAGTTTCTGCTTGCCAGAGATTTTAAGGTGAAGGAGGCTTTCACCATGATCAAGAACACAATCCGTTGGAGAAAAGAATTTGGAATGGAAGAGTTGATGGAGGAGAAGTTAGGTGATGACTTGGACAAAGTGGTGTTCATGCATGGCTTTGATAAGGAAGGTCACCCTGTGTGTTATAACATATATGGGGAATTCCAAAACAAGGAGTTGTACAAGAAGACTTTTTCTGATGAGGAGAAGAGGGAGAAGTTCCTCAAATGGAGAATTCAGTTCATGGAGAAGAGTATTAGGAAATTGGATTTCAACTCTGGTGGCATTTCCACCATTGTTCAGGTCAATGATCTCAAGAATTCTCCTGGACCTGGCAAGTGGGAACTTAGACAAGCAACCAAACAAGCCCTTCAATTGTTTCAGGACAATTATCCTGAATTTGTAGCCAAACAGGTGTTCATCAATGTGCCATGGTGGTACTTGGCAGTGAATAGAATGATAAGCCCTTTTCTTACCCAGAGAACCAAAAGCAAGTTTGTCTTTGCTGGGCCTTCCAAATCAACAGAGACCCTTTTGAGATACATAGCTCCAGAGCAACTCCCGGTCAAGTATGGTGGACTAAGCAAAGATGGGGAATTCGGAAATTCCGATGCTGTTACCGAGATTACTGTAAGACCAGCAGCAAAACATACCGTGGAGTTTCCTGTTACTGAGAAATGCTTGCTCTCTTGGGAGCTCAGAGTAATTGGGTGGGAAGTAAACTATTGTGCAGAATTTGTGCCAAGCTCAGAAGGAAGCTATACTGTAATTGTTCAGAAGGATAGAAAGGTTGCTTCATCAGAAGAGCCAGTGCTTTTCAACAGTTTTAAAGTTGATGAACCTGGAAAAGTTGTTCTCACCATTAACAACACAAGCTCTAAGAAGAAGAAGCTCTTGTACCGTTTGAAGACTAAGCCTTCCCCCGCTGATTGA 1698 0.4399 MAEEAPKQTTTTTQESVVQVVVTDVPTEKDPVPEPEKKKPVEETVTLETHLSKPNTDNNNDDDKIPESGSFKEESTKLSDLPENENKALQELKQLILEALNKHEFSAPPPSPLKEEKPTAVAAEKEQPHEEQQSTEAEPTKTEEEEKVAMKTEEKGGEKKEEVKETDVAAAASSVDDDGAKTVEAIEETVVAVSSSVPAEQQAAEEKVSETEAKDEAASLPLPPEEVSIWGIPLLADERSDVILLKFLLARDFKVKEAFTMIKNTIRWRKEFGMEELMEEKLGDDLDKVVFMHGFDKEGHPVCYNIYGEFQNKELYKKTFSDEEKREKFLKWRIQFMEKSIRKLDFNSGGISTIVQVNDLKNSPGPGKWELRQATKQALQLFQDNYPEFVAKQVFINVPWWYLAVNRMISPFLTQRTKSKFVFAGPSKSTETLLRYIAPEQLPVKYGGLSKDGEFGNSDAVTEITVRPAAKHTVEFPVTEKCLLSWELRVIGWEVNYCAEFVPSSEGSYTVIVQKDRKVASSEEPVLFNSFKVDEPGKVVLTINNTSSKKKKLLYRLKTKPSPAD* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00710 565 MobiDBLite consensus disorder prediction 55 87 - -
Rops2g00710 565 Gene3D - 197 271 - -
Rops2g00710 565 SMART CRAL_TRIO_N_2 240 265 IPR011074 -
Rops2g00710 565 CDD SEC14 285 449 IPR001251 -
Rops2g00710 565 MobiDBLite consensus disorder prediction 194 220 - -
Rops2g00710 565 SUPERFAMILY CRAL/TRIO domain 289 451 IPR036865 -
Rops2g00710 565 SUPERFAMILY CRAL/TRIO N-terminal domain 75 280 IPR036273 -
Rops2g00710 565 Gene3D - 283 464 IPR036865 -
Rops2g00710 565 MobiDBLite consensus disorder prediction 118 167 - -
Rops2g00710 565 MobiDBLite consensus disorder prediction 1 21 - -
Rops2g00710 565 Pfam CRAL/TRIO domain 289 448 IPR001251 -
Rops2g00710 565 SMART sec14_4 284 451 IPR001251 -
Rops2g00710 565 MobiDBLite consensus disorder prediction 100 176 - -
Rops2g00710 565 Gene3D GOLD domain 465 559 - -
Rops2g00710 565 PANTHER PATELLIN-1 34 562 IPR044834 GO:0008289
Rops2g00710 565 FunFam SEC14 cytosolic factor family protein 283 464 - -
Rops2g00710 565 Pfam CRAL/TRIO, N-terminal domain 224 264 IPR011074 -
Rops2g00710 565 MobiDBLite consensus disorder prediction 1 87 - -
Rops2g00710 565 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 459 558 IPR036598 -
Rops2g00710 565 ProSiteProfiles GOLD domain profile. 458 559 IPR009038 -
Rops2g00710 565 MobiDBLite consensus disorder prediction 29 46 - -
Rops2g00710 565 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 279 454 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00710 Rops-Chr2 10035321 10038468 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00710 244 443 Acyl Lipid Metabolism Gene Families AT5G47730 26.636 3.71e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00710 - - gmx:100788197 740.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00710 2 10035321 10038468 Rops2g00710 2 10035321 10038468 ECH
Rops2g00710 2 10035321 10038468 Rops10g00916 10 20286549 20289496 PCT