Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00672 ATGGGAAACTGCTGCTCCGACGTCGCCGGAGGCCGTACGGCAATCGGCGGCACCGCCGGAAATCCTCTTAAGCCGGCCGACGGACCAAACGACGCCGTAGATAACTTCCTCAGGTCTCGCGGCTACCACGGTCTCTTCTCTCAGATCGAGTTGTCGTTTTCTGCTTCTGGCTTGCGTGATCGGGATGTGCTATCCAAGAGTGATCCAATGATGGTTCTTTATGCAAGAGGAAAAAATGGAGCACTTGAGGAACTTGGCAGGACAGAAGTAGTTCTGAATTCATTGAATCCTACATGGATTACCAAGCACACTCTCATTTATCATTTTGAGGTTGTTCAGGTTTTAGTGTTTCGTGTGTATGATGTTGATACTCAGTTTCACAATGTAGATGTAAAGATGCTTAAACTAGAAGAGCAGCAATTTCTAGGTGAGGCAACCTGTGCATTATCTGAGATAATTACAAAGTCTGGTCGATCATTGACATTAGATTTACACAGAGAAGATTCTATAAGATCTAGCCACTCCCAAAACTGTGGGAAGCTCTTGGTACATGCTGAGGAATGTGTTAACTCAAAGACTACAATAGAGGTCATACTAAGGTGTTCCGATTTGGAATCTAGGGATCTCTTCTCAAAAAGTGATCCCTTTTTATTGATATCAAAAGTTGTGGAAGGTGGTGCCGATATTCCAATTTGCAAAACAGAAGTAATAAAGAATGATCATCACCCAACATGGAAGCCAGTGTTCTTGAATATTCAACAAGTAGGAAGCAAGGAAAGTCCTTTGATAATAGAGTGCTTTAACTTTAATAGCAATGGCAGACATGATTTGATAGGAAAAGTGCAGAGATCTTTGGTGGAGTTGGAGAAACTTTATTCTGGTGGCCAAGGGGAAAATTTATTTTTGCCTGCTGATGGGGGTCATAATTCTCATAACAAGTTGTTAAAGAGCCGGCTATTTGTGGACAAATTTGCTGAAAGTGTTCAATATACTTTCCTGGATTACTTGGCTGGGGGATTTGAATTGAACTTCATGGTGGCAATTGATTTTACAGCTTCAAATGGAAATCCACGCCTTCCAGATTCTTTACATTATATTGATCCTTCAGGGCGGCCAAATGCATACCAGAGGGCAATTGTTGAGGTAGGGGAAGTGTTACAGTTTTATGATTCAGACAAGCGATTTCCTACATGGGGATTTGGAGCGCGACCGATTGATGGTCCTGTCTCCCATTGTTTCAACTTGAATGGAAGCAGTCATTACTGTGAGGTGGAAGGCATCCAAGGAATTATGATGGCATACACTAGTGCCCTGCTTAATGTTTCTCTTGCAGGACCAACTCTTTTTGGTCCTGTGATAAGCAATGCTGCACTAATTGCCAGCCAATCTGTAGCAAATGGTGGAAGAAAGTACTTTGTTTTGTTAATCATCACAGATGGAGTAGTGACGGATCTCCAAGAAACAAAAGATGCTTTGGTTAAAGCATCGGACCTACCATTATCGATCCTTATTGTTGGTGTAGGAGGAGCTGATTTCAAAGAAATGGAGATTTTGGATGCAGACAAAGGAGACAGGCTTGAAAGTTCATCTGGACGTGTTGCTTCGCGTGATATAGTCCAGTTTGTTCCATTCCGGGATGTTCAAAATGGTGAAATTTCAGTAGTTCAAGCACTTCTAGCAGAATTACCTACTCAATTTTTAGCTTACATGCGGGCCAGAAATATCAAACCGAGTCTCTAG 1740 0.423 MGNCCSDVAGGRTAIGGTAGNPLKPADGPNDAVDNFLRSRGYHGLFSQIELSFSASGLRDRDVLSKSDPMMVLYARGKNGALEELGRTEVVLNSLNPTWITKHTLIYHFEVVQVLVFRVYDVDTQFHNVDVKMLKLEEQQFLGEATCALSEIITKSGRSLTLDLHREDSIRSSHSQNCGKLLVHAEECVNSKTTIEVILRCSDLESRDLFSKSDPFLLISKVVEGGADIPICKTEVIKNDHHPTWKPVFLNIQQVGSKESPLIIECFNFNSNGRHDLIGKVQRSLVELEKLYSGGQGENLFLPADGGHNSHNKLLKSRLFVDKFAESVQYTFLDYLAGGFELNFMVAIDFTASNGNPRLPDSLHYIDPSGRPNAYQRAIVEVGEVLQFYDSDKRFPTWGFGARPIDGPVSHCFNLNGSSHYCEVEGIQGIMMAYTSALLNVSLAGPTLFGPVISNAALIASQSVANGGRKYFVLLIITDGVVTDLQETKDALVKASDLPLSILIVGVGGADFKEMEILDADKGDRLESSSGRVASRDIVQFVPFRDVQNGEISVVQALLAELPTQFLAYMRARNIKPSL* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00672 579 Pfam Copine 362 577 IPR010734 -
Rops2g00672 579 SUPERFAMILY vWA-like 342 524 IPR036465 -
Rops2g00672 579 ProSiteProfiles C2 domain profile. 28 162 IPR000008 -
Rops2g00672 579 FunFam Protein BONZAI 1 51 194 - -
Rops2g00672 579 CDD C2B_Copine 195 290 IPR037768 -
Rops2g00672 579 CDD C2A_Copine 47 164 - -
Rops2g00672 579 Gene3D C2 domain 194 313 IPR035892 -
Rops2g00672 579 SMART C2_3c 198 300 IPR000008 -
Rops2g00672 579 SMART C2_3c 48 161 IPR000008 -
Rops2g00672 579 PANTHER COPINE 34 578 IPR045052 GO:0005544
Rops2g00672 579 SMART VWA_4 341 538 IPR002035 -
Rops2g00672 579 CDD vWA_copine_like 312 566 IPR010734 -
Rops2g00672 579 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 198 291 IPR035892 -
Rops2g00672 579 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 53 166 IPR035892 -
Rops2g00672 579 ProSiteProfiles C2 domain profile. 177 301 IPR000008 -
Rops2g00672 579 Gene3D C2 domain 52 193 IPR035892 -
Rops2g00672 579 Pfam C2 domain 54 159 IPR000008 -
Rops2g00672 579 Pfam C2 domain 198 289 IPR000008 -
Rops2g00672 579 FunFam Protein BONZAI 1 isoform A 195 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00672 Rops-Chr2 9542346 9552475 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00672 - - gmx:100807801 1042.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00672 2 9542346 9552475 Rops10g00870 10 19717525 19725364 PCT