Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00671 ATGGCATCCGAACCGTGCAGAGAAAGGAAACCAATGGAACAAAACGGCGTCGTCAACGGTGTAAGACGTAGTGACAGGGAAGAACACGAGGAAGCATTGGTGTCTCTGGTTGAACTCTGTTCCCATGAAGTCAAAAACCTCCGTTACTACATCTCCTATTATACTTCCAAGCTTGAGAAAGCAGAAAAGAAGTTGCAAGATGCTAAATCCAAATTGGCTCGCCTTCGACTTCGAGGTTCTCGTTCTTCTGCAAAGGCTCCTCCAATAACCTCCAATTCTCAACCCAACTCATCAGCTTTTAAATCTGATAAGTCTCAGAGACTTTCTACAGAGCAGGAAAATGCTGAAATCAAGGGCAGTGAGAGAAAAAGGAAGTTTGAACAGCAAGAACACAAGGAATTGATTCCTTTAATATGTAAAAGTCATTCACCAGCCTCGGTGAACTGTCAAACAAGCAACCATATATCAAGTCAACACAAAAGGAAATTACGAAGTATTGCTGTGTGTCCTGTGAATGATCAGCTTTTTGTGACCAGTGCTCTGGATGGAATGGTCAACTTGTGGGAAGTTCAGTCTGGGGGATCAAGAGCCTCTCAGCTTAGCACCACTGACTGTGTATCCCCAGAACAGAAGAGATGGCCAGAAGATATAGCTTGGCACCCAGAGGGAAACAGCTTGTTTTCAGTATATAGTGCTGATGGTCAAGACTCTCAAGTATCAGTTATGAATTTGAATAGAGAAAAAGGGGAAGGGAGAGTAGATGTAAATTTCTTAGAGGACAAGCCTCATGCTAAGGGTGTTATCAATAACATTGTTTTCCTGCCCTGGGAAAATACCAGTTTTGTCACCGGAGGAACTGACCATGCTGTTGTACTATGGAGGGAGAAAGGTGAGAACAAGTGGAAGCCAAAATCATTGCATCGGAATATTCATTCTTCTGCAGTCATGGGAGTTGCTGGTATGCAGCAGAAGCAAATCGTGTTGTCCGCTGGTAAAGACAAGAGAATTTTGGGATACAATGCTCTTGTAGGAAGACAAGATTTCATGCACCAGGTTGATAGTAAATGCTTGAGTGTCCTGCCAAATCCATGTGACTTCAATTTATTTATGGTCCAAACAGGGACTCATGAGAGGCAACTTAGATTATTTGATATTAGAATGAGGCAGACAGAACTTCATGCTTTTGGATGGAAGCAAGAGAGCAGTGAATCTCAGTCAGCTTTGGTAAATCAGGCTTGGTCTCCCAATGGACTGTATATAACATCTGGTTCAGCTGATCCTATGATTCACATATTTGACATTAGATATAATGGTCACAAGCCTTCCCAATCTATAGAAGCTCATAAGAGACGAGTCTTCAGAGCTATGTGGCTTCAGTCTGTGCCTCTTCTCATTTCCATATCATCTGATCTCAACATTGGATTACACAAGGTTGTGTAG 1440 0.425 MASEPCRERKPMEQNGVVNGVRRSDREEHEEALVSLVELCSHEVKNLRYYISYYTSKLEKAEKKLQDAKSKLARLRLRGSRSSAKAPPITSNSQPNSSAFKSDKSQRLSTEQENAEIKGSERKRKFEQQEHKELIPLICKSHSPASVNCQTSNHISSQHKRKLRSIAVCPVNDQLFVTSALDGMVNLWEVQSGGSRASQLSTTDCVSPEQKRWPEDIAWHPEGNSLFSVYSADGQDSQVSVMNLNREKGEGRVDVNFLEDKPHAKGVINNIVFLPWENTSFVTGGTDHAVVLWREKGENKWKPKSLHRNIHSSAVMGVAGMQQKQIVLSAGKDKRILGYNALVGRQDFMHQVDSKCLSVLPNPCDFNLFMVQTGTHERQLRLFDIRMRQTELHAFGWKQESSESQSALVNQAWSPNGLYITSGSADPMIHIFDIRYNGHKPSQSIEAHKRRVFRAMWLQSVPLLISISSDLNIGLHKVV* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00671 479 SUPERFAMILY WD40 repeat-like 161 475 IPR036322 GO:0005515
Rops2g00671 479 PANTHER TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN 99 478 - -
Rops2g00671 479 SMART WD40_4 302 340 IPR001680 GO:0005515
Rops2g00671 479 SMART WD40_4 396 433 IPR001680 GO:0005515
Rops2g00671 479 SMART WD40_4 438 477 IPR001680 GO:0005515
Rops2g00671 479 SMART WD40_4 254 294 IPR001680 GO:0005515
Rops2g00671 479 SMART WD40_4 146 189 IPR001680 GO:0005515
Rops2g00671 479 ProSiteProfiles Trp-Asp (WD) repeats profile. 156 198 IPR001680 GO:0005515
Rops2g00671 479 MobiDBLite consensus disorder prediction 76 126 - -
Rops2g00671 479 Gene3D - 356 479 IPR015943 GO:0005515
Rops2g00671 479 MobiDBLite consensus disorder prediction 1 27 - -
Rops2g00671 479 MobiDBLite consensus disorder prediction 84 105 - -
Rops2g00671 479 Coils Coil 51 78 - -
Rops2g00671 479 Gene3D - 90 355 IPR015943 GO:0005515
Rops2g00671 479 MobiDBLite consensus disorder prediction 106 126 - -
Rops2g00671 479 Pfam WD domain, G-beta repeat 410 433 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00671 Rops-Chr2 9531668 9534849 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00671 - - ccaj:109813667 648.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00671 2 9531668 9534849 Rops10g00869 10 19708926 19712249 PCT