Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00869 ATGCGGGTCCAAGGCACACGTGGCAACATGAAAGAATCTTTTTCAACAAGATTATGGGGTCGACCCATTTCATTTGGAGGAACACAACACAAGTTGGTCTTCCTCACTACTCTCCTCTCAACCCTTTACTGGCTTCCCTCTCTGAATAGTGATACAATGGAAGCAGATGAAGAGGGCATGAAGCAAGAGCTTGCTGGCTTTATTTTCATGTGTAATAAAATAACAAAACCAGAGTGCTACCGATATCGAGTTTTTGGGCTTCCTGCAGGTAGAAAGGAAGTTGTAGAGAAGATCAATCCTGGCACATACCTTTTTCTGTTTGACACTGATGTGAAGCTTCTCTATGGCATATATATGGCATCCTCTACTGGGAAGCTAAAGATAGAACCAAATGCTTTTGGTGGGAAATTCCCTGCTCAGGTGAGATTCAAAATTTATAAAGACTGTTTACCCTTGCCAGAGAATTGCTTTAGACATGCCATTCAAGATAATTACCAGAAAAACTCCAACAAATTTAATCCTGAGCTCAATACTAGACAAGTAAGATGTCTATTAGAATTGTTTCCCCCATTACTTGTATTGTCAACTGCACCTAGGCAACCTGTTTCAAACAAGATATACTCTCCCTCAATGCCGCCACTTCCTCCAGTTCATAATGTTTATCATCAAATATCAAGGCCATCACTTTCTGAGGATGCATATTTGCCTAGCATGTTACCTAATCAAGCTCCAAGGCAGTTGAACTATAAACATGTAAATGAACTCAAGGAGCCTACTGGTTGTGCTTATCCTGTCTATAATTTGATGCCAAATTCAGCTGCAGCACAGTCTGTTCTATCACAAGCTTCAAGGAATCAGCTTCATGCCCCAGCAAGTTCACTTACTCCTGAGTGTACTTATGCCACTGGGATGGGCAGCAGTTATACTCAATCACTACCGGATCCTCAATATACACATCAGAATACCCTTAATCCACAACCTGAATTTCATTCATCCATGGTGAATAGGGGCAATGATCATGCTCAGTCATTGCAAGATTCTCAACATGCACATCATAATGTCCTACATCCACAACCTGATTTTCATTCTTTCATGATAACTAGGGGTGGCAGTCATGCTCAGTCACTTCAAGATCCTCAATATACACATAACAATACCCTTAACCTGCAACCAGAATTCCATTCATCCCTGGTGAATGGGGGCAGTGATCATGCTCAGTCATTGCCAGATTCTCAATATGCACATCATAATGCCCTACATCCACAACCTGAATTTCATTCTCAACATGCCCAATCATTTCAGGATCCTCAACATCCACATCAAAGTATTGTAAGCCCAGCACCTGGTTTTAATTCCCCTGTAGCAAATGTGGGTAGCAGTCATGCTCAATTGTCGCAGAATCCTCACTATACGTGCCCAGATATCCTAAATGTGCCACCTGACTCTTATTCCACCATGCCAAGTATGGGTAGTAGTAGTTATCTACAACCCGATTTCAATTCCTCCTTGGTGGGTATGGACCATGCCAATGTCATGATGCAGTCATACGCTGCTTCATCATTATATTGTCCATACGTTCCTCAAGAAGTTGTTTCTTCCACGTCTTCATATCAAGGGTTTGGAGTCACACAAGGGGTGTTATCTAGTGGTGAACAACCTGGAATGGGAAGTGAGCATTATCAGCCATCCATGAATATTCGCTGA 1704 0.4202 MRVQGTRGNMKESFSTRLWGRPISFGGTQHKLVFLTTLLSTLYWLPSLNSDTMEADEEGMKQELAGFIFMCNKITKPECYRYRVFGLPAGRKEVVEKINPGTYLFLFDTDVKLLYGIYMASSTGKLKIEPNAFGGKFPAQVRFKIYKDCLPLPENCFRHAIQDNYQKNSNKFNPELNTRQVRCLLELFPPLLVLSTAPRQPVSNKIYSPSMPPLPPVHNVYHQISRPSLSEDAYLPSMLPNQAPRQLNYKHVNELKEPTGCAYPVYNLMPNSAAAQSVLSQASRNQLHAPASSLTPECTYATGMGSSYTQSLPDPQYTHQNTLNPQPEFHSSMVNRGNDHAQSLQDSQHAHHNVLHPQPDFHSFMITRGGSHAQSLQDPQYTHNNTLNLQPEFHSSLVNGGSDHAQSLPDSQYAHHNALHPQPEFHSQHAQSFQDPQHPHQSIVSPAPGFNSPVANVGSSHAQLSQNPHYTCPDILNVPPDSYSTMPSMGSSSYLQPDFNSSLVGMDHANVMMQSYAASSLYCPYVPQEVVSSTSSYQGFGVTQGVLSSGEQPGMGSEHYQPSMNIR* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00869 567 SMART dcd 62 190 IPR013989 -
Rops10g00869 567 MobiDBLite consensus disorder prediction 318 352 - -
Rops10g00869 567 PANTHER DCD (DEVELOPMENT AND CELL DEATH) DOMAIN PROTEIN-RELATED 52 461 - -
Rops10g00869 567 Pfam Development and cell death domain 65 188 IPR013989 -
Rops10g00869 567 MobiDBLite consensus disorder prediction 547 567 - -
Rops10g00869 567 MobiDBLite consensus disorder prediction 424 472 - -
Rops10g00869 567 MobiDBLite consensus disorder prediction 424 476 - -
Rops10g00869 567 ProSiteProfiles DCD domain profile. 62 190 IPR013989 -
Rops10g00869 567 MobiDBLite consensus disorder prediction 318 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00869 Rops-Chr10 19708926 19712249 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00869 - - cam:101492997 535.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g00869 10 19708926 19712249 Rops10g00869 10 19708926 19712249 ECH
Rops2g00671 2 9531668 9534849 Rops10g00869 10 19708926 19712249 PCT