Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00634 ATGGCCATGCACCGTGAATCCTGGGCTTTTGTGTTCGGCCTTTTAGGCAACATCATCTCCTTTATGGTGTTCCTTGCCCCATTACCCACTTTTTACCAAATCTACAAGAAGAAATCTACTGAAGGGTTTCAGTCACTTCCTTATGTTGTTGCACTGTTCAGTGCCATGCTTTGGATTTACTATGCATTCGTCAAAAGGGAATCTGCCCTCCTTCTCATCACCATTAACACCTTTGGAATTATTGTAGAGTCAGCTTACCTTACAATGTTCCTAGTTTATGCCCATAAGAAGGCTAGGTTTTCGACAATCAGAACTCTTCTCTTGCTGAATGTGTTTGGATTCGGAGCCATGCTCTTAGCAACTCTTTACCTTTCAAAGGGAGCAAAGCGTCTTGCCATTATAGGGTGGATTGCCTTGGTTTTCAACATTAGTGTGTTTGCTGCGCCTCTCTTCATTATTAGACGAGTCATAAAGACTAGGAGCGTGGAATACATGCCGTTTTTTTTGTCCTTCTTTTTGACCATCAATGCTGTTATGTGGTTCTTCTATGGCCTTCTCCTCAAGGATTATTATGTTGCTCTACCAAACACACTTGGGTTTCTGTTTGGCATAATTCAGATGGTGATGTATTTGATATACAGAAACGCCACTCCAGTGGCACTAGAGGAGCCAGTGAAGGCACAAGAATTTAATGGTGGCCATATCATTGATGTTGTAAAGAAGGGTTCAATGGTACCTTCTGACCCAAATCATGCAGCTCCAGCAGCGACGACCGGAGAAGCTGGAGGAGCTGATGACGCGCGACGCAGCAACGGCGACTGGATGACGCGCGACGCTCGATGGCTCCCAGGCAGCAGCAGCGATGGCACGGGCTGGGGCGGCGGCGGCGACAATGCTAGGGCTTGA 906 0.4669 MAMHRESWAFVFGLLGNIISFMVFLAPLPTFYQIYKKKSTEGFQSLPYVVALFSAMLWIYYAFVKRESALLLITINTFGIIVESAYLTMFLVYAHKKARFSTIRTLLLLNVFGFGAMLLATLYLSKGAKRLAIIGWIALVFNISVFAAPLFIIRRVIKTRSVEYMPFFLSFFLTINAVMWFFYGLLLKDYYVALPNTLGFLFGIIQMVMYLIYRNATPVALEEPVKAQEFNGGHIIDVVKKGSMVPSDPNHAAPAATTGEAGGADDARRSNGDWMTRDARWLPGSSSDGTGWGGGGDNARA* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00634 301 FunFam Bidirectional sugar transporter SWEET 130 222 - -
Rops2g00634 301 PANTHER RAG1-ACTIVATING PROTEIN 1 14 224 IPR047664 -
Rops2g00634 301 MobiDBLite consensus disorder prediction 247 301 - -
Rops2g00634 301 Gene3D - 11 99 - -
Rops2g00634 301 Pfam Sugar efflux transporter for intercellular exchange 133 216 IPR004316 GO:0016020
Rops2g00634 301 Pfam Sugar efflux transporter for intercellular exchange 11 97 IPR004316 GO:0016020
Rops2g00634 301 Gene3D - 129 220 - -
Rops2g00634 301 FunFam Bidirectional sugar transporter SWEET 10 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00634 Rops-Chr2 9062611 9069267 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00634 1 255 Miscellaneous Gene Families AT5G50800 55.385 2.48e-95 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00634 K15382 - gmx:100805676 432.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00634 2 9062611 9069267 Rops2g00634 2 9062611 9069267 ECH
Rops2g00634 2 9062611 9069267 Rops10g00840 10 19225435 19228052 PCT