Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00840 ATGGCCATTCACCATGAAACTTGGGCTTTTGTTTTCGGCCTTCTAGGCAACGTCATCTCCTTCATGGTGTTCCTTGCTCCACTACCAACATTTTACCAAATCTACAAGAAGAAATCAACTGAAGGGTTTCAGTCACTTCCTTATGTTGTTGCACTGTTCAGTTCAATGCTGTGGATTTATTATGCACTGGTTAAAAACAACGCTAGCCTCCTTCTCATCACCATTAACTCACTTGGATGTGTGATAGAGTCAATTTACCTTGCCATTTTCCTAATTAACGCCCCAAAAAACACCAGGCTTTCTACCATCAAGCTTCTTCTGTTGTTGAATGTGTTTGGATTCGGAGCTATGCTTCTTTCAACCCTCTACCTCACAACAGGATCCAAGCGTCTTTCTGTCATAGGATGGATTTGCCTTGTTTTCAACATAAGCGTATTTGCTGCTCCTCTTTGCATTATGAAACGCGTCATAAAGACCAAGAGTGTGGAATACATGCCTTTTAGTTTGTCCTTTTTCTTGACCTTGAATGCAGTCATGTGGTTCTTCTATGGTCTTCTCCTCAAGGACTATTATATTGCCCTCCCAAATACACTTGGGTTTCTCTTCGGCATTATTCAGATGGTGCTGTATTTGATTTATAGAAACGCCGAGAAAGTGACACTAGAGGAGCCAGTGAAGCTGCAAGAACTAAATGGTCATAACCATATTATTGATGTTGTGAAGCTGAGTACAATGGTGCCCTCAGACCCAAATTCTTTGACTGTGACATCTGATGAGGATTCAAATGGAATAGAAGAAACACAAAAGGGTAACCAGAAGAACACTGGCAGAGTGTGA 837 0.4134 MAIHHETWAFVFGLLGNVISFMVFLAPLPTFYQIYKKKSTEGFQSLPYVVALFSSMLWIYYALVKNNASLLLITINSLGCVIESIYLAIFLINAPKNTRLSTIKLLLLLNVFGFGAMLLSTLYLTTGSKRLSVIGWICLVFNISVFAAPLCIMKRVIKTKSVEYMPFSLSFFLTLNAVMWFFYGLLLKDYYIALPNTLGFLFGIIQMVLYLIYRNAEKVTLEEPVKLQELNGHNHIIDVVKLSTMVPSDPNSLTVTSDEDSNGIEETQKGNQKNTGRV* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00840 278 Gene3D - 129 224 - -
Rops10g00840 278 Pfam Sugar efflux transporter for intercellular exchange 133 217 IPR004316 GO:0016020
Rops10g00840 278 Pfam Sugar efflux transporter for intercellular exchange 11 96 IPR004316 GO:0016020
Rops10g00840 278 FunFam Bidirectional sugar transporter SWEET 10 99 - -
Rops10g00840 278 PANTHER RAG1-ACTIVATING PROTEIN 1 18 230 IPR047664 -
Rops10g00840 278 Gene3D - 11 97 - -
Rops10g00840 278 FunFam Bidirectional sugar transporter SWEET 130 222 - -
Rops10g00840 278 MobiDBLite consensus disorder prediction 250 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00840 Rops-Chr10 19225435 19228052 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00840 1 277 Miscellaneous Gene Families AT5G50790 52.650 3.80e-103 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00840 K15382 - gmx:100794434 436.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00634 2 9062611 9069267 Rops10g00840 10 19225435 19228052 PCT