Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00607 ATGGGAGAGGAAGAAAAGAAACCAGAGGAAAACAAAGTGGAGGAGAAAAAACCAGAGGAACCCAAGAAGGAAGAAGGGAAGAAGGAAGTGAAAGAGAAGCAAGAACCTGCGGAAGAGAAAAAACCGGAGGAATCAAAAGATGGGAAGGAATCCAAGGAACAAGCTGCGCCGCCAGAAATTGTGCTTAAAGTGTTCATGCATTGTGAAGGTTGTGCTCGCAAGGTTCGTAGGTCCCTCAAAGGATTCCCAGGGGTTGAAGATGTAATCACTGATTGCAAGACTCATAAGGTGGTGGTTAAAGGAGAAAAAGCGGATCCAGTGAAGGTTCTAGAGAGAGTACAGAGGAAGAGTCATAGACAGGTTGAGCTTCTTTCTCCGATCCCAAAACCACCGGCGGAGGAGGAGAAAAAACCCGAAGAGAAAGAGAAGCCCAAACCCGAGGAGAAGAAAGAAGAGCCTCAGGTCATCACAGTTGTTCTGAAAGTTCACATGCATTGCGAAGCTTGTTCGCAAGAAATCAAGAGACGCATAGAGAGAATGAAAGGAGTAGAATCAGCAGAACCGGATCTGAAGAACTCGCTGGTGAGTGTGAAGGGAGTGTTTGAGACTTCAAAGTTGGTGGAATATGTGTATAAGAGGACTGGAAAACAGGCGACAATAGTGAAGCAAGAGGGAGAGAAAAAAGAGGAAGCAAAAGAAGGCAAAGAGGAGAAGAAAGGTGACAAAGATCAGAAGGGAAGTGGTGAAGGAGAGGAAAACAAGGAGAAGAAAGAAGGAGAAGGAGATGCTAAAGCAGCAGAGGCAAGTGCAGAAGAAACAAAGGTGGTGGAACTGAAGAAGAATGAGTACTATTACAACCCACCAAGGTATGGGATGGAGTTCTATGCATATCCTGGGCCAGCATACCCACCCCAGATCTTCAGTGATGAGAACCCCAATGCTTGCACTGTCATGTAA 957 0.4587 MGEEEKKPEENKVEEKKPEEPKKEEGKKEVKEKQEPAEEKKPEESKDGKESKEQAAPPEIVLKVFMHCEGCARKVRRSLKGFPGVEDVITDCKTHKVVVKGEKADPVKVLERVQRKSHRQVELLSPIPKPPAEEEKKPEEKEKPKPEEKKEEPQVITVVLKVHMHCEACSQEIKRRIERMKGVESAEPDLKNSLVSVKGVFETSKLVEYVYKRTGKQATIVKQEGEKKEEAKEGKEEKKGDKDQKGSGEGEENKEKKEGEGDAKAAEASAEETKVVELKKNEYYYNPPRYGMEFYAYPGPAYPPQIFSDENPNACTVM* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00607 318 SUPERFAMILY HMA, heavy metal-associated domain 153 224 IPR036163 GO:0046872
Rops2g00607 318 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 7 40 318 IPR044577 GO:0046872
Rops2g00607 318 Gene3D - 56 129 - -
Rops2g00607 318 CDD HMA 159 219 IPR006121 GO:0046872
Rops2g00607 318 MobiDBLite consensus disorder prediction 113 154 - -
Rops2g00607 318 CDD HMA 66 122 IPR006121 GO:0046872
Rops2g00607 318 Gene3D - 152 221 - -
Rops2g00607 318 MobiDBLite consensus disorder prediction 1 56 - -
Rops2g00607 318 SUPERFAMILY HMA, heavy metal-associated domain 61 116 IPR036163 GO:0046872
Rops2g00607 318 ProSiteProfiles Heavy-metal-associated domain profile. 155 219 IPR006121 GO:0046872
Rops2g00607 318 ProSiteProfiles Heavy-metal-associated domain profile. 57 121 IPR006121 GO:0046872
Rops2g00607 318 MobiDBLite consensus disorder prediction 222 272 - -
Rops2g00607 318 MobiDBLite consensus disorder prediction 129 154 - -
Rops2g00607 318 Pfam Heavy-metal-associated domain 160 215 IPR006121 GO:0046872
Rops2g00607 318 Pfam Heavy-metal-associated domain 62 115 IPR006121 GO:0046872
Rops2g00607 318 MobiDBLite consensus disorder prediction 1 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00607 Rops-Chr2 8636658 8638573 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00607 - - gmx:100796289 349.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00607 2 8636658 8638573 Rops2g00607 2 8636658 8638573 ECH
Rops2g00607 2 8636658 8638573 Rops10g00828 10 19000651 19002795 PCT