Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00828 ATGGGGGAGGAAGAAAAGAAATCAGAGGAAACCAAAGTGGAGGAGAAAAAACCAGAGGAATCCAAAAAGACAGAAGAAGAAAAACCAGAGGAATCAAAAGATGGCAAAGAATCCAAAGGTTGTGCTCGCAAGGTTCGTAGGTCCCTCAAAGGATCCCCAGGGGTTGAAGATGTAATAACTGATTGCAAATCTCACAAGGTGGTGGTTAAAGGAGATAAAGCTGATCCACTGAAGGTTTTGGAGAGAGTACAGAGGAAAAGTCATAGGCAGGTTGAGCTTCTTTCTCCGATCCCAAAACCACCGGAGGAGAAAAAAGTAGTAGAGGAAGAAAAGCCTAAGCCAGAGGAGAAGAAAGAAGAGCCTCAGAGTGTCACAGTTGTTCTTAAAGTTCACATGCATTGCGAAGCTTGTGCACAAGAAATCAAGAGACGAATACAGAGAATGAAGGGAGTGGAATCAGCGGAACCTGATCTGAAGAACTCACAGGTTAGTGTAAAGGGTGTGTATGATCCTGCCATGTTGGTTGAACACGTGTACAAAAGAACTGGGAAGCACGCAGTGATCGTGAAGCAAGAATCAGAGAAGAAAGAGAAAGTAGAGGAAGTGAAAGAAACCAAACAGGAAGAAAAGAAAACCGAGGAAGGTGAGAAAGTCGAGAAGAAGAGTGAAGGGGAAGAAACCAAGGAGAAGAAAGAAGAAGCAAAAGTTGAGGCCAAACCAGAGGAAGGGGTGGTAGCTATAGAAGAGACCAATGTGGCAGAGGTGAAGAAGAATGAATATTACTATAACGCACCAATGTATGGCATGGAGTTGTATGCATATCCAGCTTACCCTACTTACCATTACCAACCTTACCCACCTCAGATTTTCAGTGATGAGAACCCAAATGCCTGTACTGTCATGTAA 906 0.436 MGEEEKKSEETKVEEKKPEESKKTEEEKPEESKDGKESKGCARKVRRSLKGSPGVEDVITDCKSHKVVVKGDKADPLKVLERVQRKSHRQVELLSPIPKPPEEKKVVEEEKPKPEEKKEEPQSVTVVLKVHMHCEACAQEIKRRIQRMKGVESAEPDLKNSQVSVKGVYDPAMLVEHVYKRTGKHAVIVKQESEKKEKVEEVKETKQEEKKTEEGEKVEKKSEGEETKEKKEEAKVEAKPEEGVVAIEETNVAEVKKNEYYYNAPMYGMELYAYPAYPTYHYQPYPPQIFSDENPNACTVM* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00828 301 Gene3D - 120 189 - -
Rops10g00828 301 ProSiteProfiles Heavy-metal-associated domain profile. 123 187 IPR006121 GO:0046872
Rops10g00828 301 CDD HMA 40 92 IPR006121 GO:0046872
Rops10g00828 301 CDD HMA 127 186 IPR006121 GO:0046872
Rops10g00828 301 MobiDBLite consensus disorder prediction 1 44 - -
Rops10g00828 301 SUPERFAMILY HMA, heavy metal-associated domain 39 86 IPR036163 GO:0046872
Rops10g00828 301 ProSiteProfiles Heavy-metal-associated domain profile. 27 91 IPR006121 GO:0046872
Rops10g00828 301 SUPERFAMILY HMA, heavy metal-associated domain 122 192 IPR036163 GO:0046872
Rops10g00828 301 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 7 16 301 IPR044577 GO:0046872
Rops10g00828 301 MobiDBLite consensus disorder prediction 1 65 - -
Rops10g00828 301 MobiDBLite consensus disorder prediction 192 240 - -
Rops10g00828 301 Pfam Heavy-metal-associated domain 128 180 IPR006121 GO:0046872
Rops10g00828 301 Pfam Heavy-metal-associated domain 39 85 IPR006121 GO:0046872
Rops10g00828 301 MobiDBLite consensus disorder prediction 83 123 - -
Rops10g00828 301 Coils Coil 188 237 - -
Rops10g00828 301 MobiDBLite consensus disorder prediction 98 123 - -
Rops10g00828 301 Gene3D - 34 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00828 Rops-Chr10 19000651 19002795 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00828 - - gmx:100787932 276.944
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g00828 10 19000651 19002795 Rops10g00828 10 19000651 19002795 ECH
Rops2g00607 2 8636658 8638573 Rops10g00828 10 19000651 19002795 PCT