Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00600 ATGTCAAGTCACGGTGGTTCTTCTAGAAGGACCAGTTCGTTGACGAATAGCCCGACGCGGGCAAGGAAGAAAGCCTCTGAGATTTCATCGCCTGATTCCAGTGCTCGTAGTAAATCAATTACTTCGATACGTACCACGGGAGAGCGAACTGTGAAATCATTGAGGCTTTCAAAGGCATTGACAGTACCTGAAACAACAACTATCCATGAAGCTTGCCGTAGGATGGCTGCACGCAAAGTGGATGCTTTATTACTAACCGATTCTAATGCTTTGCTCTGTGGAATCCTCACAGACAAGGATATAGCAACAAGAGTTATTGCCCGTGAGGTTAATCTTGAAGAGACACCTGTTGCCAAGGTTATGACAAGGAATCCAGTATTTGTCCTTACCGATACTCTTGCTGTGGAAGCCCTCCAAAAGATGGTGCAAGGGAAATTCAGACATTTACCTGTGGTGGAAAATGGAGAAGTTGTTGCCATACTTGACATAGCAAAGTGTTTGTATGATGCCATTGCCCGTATGGAAAGGGCAGCTGAGAAAGGAAAGGCAATTGCTGCAGCTGTTGAAGGTATCGAAAAACACTGGAGAACATCTGCTTCTGGTTCCAATTCATCATTCTTTGATACTCTTCGCGAGCAGATATTTAAGCCATCATTGTCTACAATCATTCCTGAGAATTCAAAGGTTGTAACCGTTTCTCCGACAGACTCGGTTTTGACAACAACAAAGAAGATGCTTGAACTTCGTTCAAGTTCTGCCGTTGTGACGGTTGATGACAAACCTTGTGGTATCCTTACTTCAAAGGATATCTTGATGCGGGTAATAGCACAAAATATTCCTCCATCGTTAACACTTATTGAGAAGGTCATGACTCCAAATCCAGAATGCGCAACAATTGACACACCAATTGTTGATGCACTTCACACTATGCATGATGGAAAATTTTTGCATCTTCCTGTTGTCGATAGAGATGGCATTGTCGTTGCTATGGTTGACGTGATTCATATCACTCATGCTGCTGTGGCGACAGCTAGTCAGGTTGGAAATTCTGCCAATTTGACCAATGAAGCTGCCAACTCCGTGATTCAAAAATTTTGGGATTCGGCCATGGCCTTACCTCCAAATGAAGAAGAAGAAGAAGATTCACAAAGCGACACTTCCTTGAAATTGATTTCTGACGGAGGAGAAACAGGGAGATCCTCCATTCCTTATCTAACGTCAAACATGCAGCACACGTTTTCCTTCAAAATACAAGATAAGAAGGGCAGATTGCATAGATTCACATGCGATACTCGGAGATTGACAGAGGTTATATCCTCCATCATTCAGAGAGTCGGTGATGATATTGACCCCAAGAACTTGCCCCAAATTTTGTACGAAGATGAAGAACATGATAAAGTTGTACTGGCTTCAGACAGCGATCTTGCTGCAGCTGTGGACCACGCAAAAATGGCTGGTTTGAAGGGATTGAGATTGCATTTAGACTACTCAGGAACACGTGATAATGGAAACGATTCAAGTTCAAGAAGTTTGGAATACGCTAATTCAGAAGCATGGGCCTCGGCATATGGTGCCGTTGCTGCTGGAGCTGCAATTATTGCTGGCTTAGGCCTATTAGCATTCTTGAGGCGAAGTTAA 1638 0.4347 MSSHGGSSRRTSSLTNSPTRARKKASEISSPDSSARSKSITSIRTTGERTVKSLRLSKALTVPETTTIHEACRRMAARKVDALLLTDSNALLCGILTDKDIATRVIAREVNLEETPVAKVMTRNPVFVLTDTLAVEALQKMVQGKFRHLPVVENGEVVAILDIAKCLYDAIARMERAAEKGKAIAAAVEGIEKHWRTSASGSNSSFFDTLREQIFKPSLSTIIPENSKVVTVSPTDSVLTTTKKMLELRSSSAVVTVDDKPCGILTSKDILMRVIAQNIPPSLTLIEKVMTPNPECATIDTPIVDALHTMHDGKFLHLPVVDRDGIVVAMVDVIHITHAAVATASQVGNSANLTNEAANSVIQKFWDSAMALPPNEEEEEDSQSDTSLKLISDGGETGRSSIPYLTSNMQHTFSFKIQDKKGRLHRFTCDTRRLTEVISSIIQRVGDDIDPKNLPQILYEDEEHDKVVLASDSDLAAAVDHAKMAGLKGLRLHLDYSGTRDNGNDSSSRSLEYANSEAWASAYGAVAAGAAIIAGLGLLAFLRRS* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00600 545 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 37 481 - -
Rops2g00600 545 Pfam CBS domain 226 272 IPR000644 -
Rops2g00600 545 Pfam CBS domain 57 103 IPR000644 -
Rops2g00600 545 Pfam CBS domain 287 338 IPR000644 -
Rops2g00600 545 Pfam CBS domain 117 161 IPR000644 -
Rops2g00600 545 CDD CBS_pair_MUG70_1 56 172 - -
Rops2g00600 545 Gene3D - 192 352 IPR046342 -
Rops2g00600 545 Gene3D - 26 186 IPR046342 -
Rops2g00600 545 ProSiteProfiles CBS domain profile. 121 179 IPR000644 -
Rops2g00600 545 ProSiteProfiles PB1 domain profile. 410 497 IPR000270 GO:0005515
Rops2g00600 545 ProSiteProfiles CBS domain profile. 290 347 IPR000644 -
Rops2g00600 545 ProSiteProfiles CBS domain profile. 55 114 IPR000644 -
Rops2g00600 545 MobiDBLite consensus disorder prediction 1 46 - -
Rops2g00600 545 Pfam PB1 domain 412 495 IPR000270 GO:0005515
Rops2g00600 545 SUPERFAMILY CAD & PB1 domains 404 494 - -
Rops2g00600 545 SMART cbs_1 228 275 IPR000644 -
Rops2g00600 545 SMART cbs_1 293 341 IPR000644 -
Rops2g00600 545 SMART cbs_1 124 168 IPR000644 -
Rops2g00600 545 SMART cbs_1 58 106 IPR000644 -
Rops2g00600 545 SUPERFAMILY CBS-domain pair 48 164 IPR046342 -
Rops2g00600 545 Coils Coil 542 545 - -
Rops2g00600 545 SUPERFAMILY CBS-domain pair 227 340 IPR046342 -
Rops2g00600 545 CDD PB1_MUG70 413 497 - -
Rops2g00600 545 ProSiteProfiles CBS domain profile. 222 282 IPR000644 -
Rops2g00600 545 SMART PB1_new 412 497 IPR000270 GO:0005515
Rops2g00600 545 CDD CBS_pair_MUG70_2 226 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00600 Rops-Chr2 8556050 8562451 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00600 - - gmx:100783514 803.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00600 2 8556050 8562451 Rops2g00600 2 8556050 8562451 ECH
Rops10g00823 10 18859903 18868177 Rops2g00600 2 8556050 8562451 PCT